Shewanella carassii: TUM17387_29950
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Entry
TUM17387_29950 CDS
T07543
Symbol
atmA
Name
(GenBank) ABC transporter
KO
K24821
ATP-binding cassette, subfamily B, heavy metal transporter
Organism
scaa
Shewanella carassii
Pathway
scaa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TUM17387_29950 (atmA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaa02000
]
TUM17387_29950 (atmA)
Transporters [BR:
scaa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
TUM17387_29950 (atmA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_22
ABC_ATPase
AAA_29
RsgA_GTPase
DUF87
AAA_5
AAA
DUF815
Zeta_toxin
MMR_HSR1
Septin
DUF5423
nSTAND1
AAA_15
Motif
Other DBs
NCBI-ProteinID:
BCV67636
LinkDB
All DBs
Position
complement(3382182..3383987)
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AA seq
601 aa
AA seq
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MRPTLYLEGPVDKLNWQVLKLLWPYLLEYKGRIMLALSCLVVGKLASVGLPFLLKHLVDD
LGGEQTAQLLVVPIALVLAYGGLRLVNALTGEIRDTLFGRVTERAIRRLGLQVFEHLHRL
DLGFHLDRRTGGLSRDIERGTSGISFLMRFMVFNIVPTLLEILMVVAILLWNYGIWFALI
TFCSVLAYGLFSVVTTEWRTSYVREAAKADSVSNTRAIDSLLNYETVKYFNNEAYEANEY
DKALADWEVAKRKNRLSLFALNAGQATIIAIAMTLMLGLAAFEVTRGQMTVGDFVLINAF
MMQLFMPLNFLGFVYREIRGALANIERMFSLLDKTPLVKDSPTAKAVSLTEGLISFDSVG
FGYGDRQILKGVSFEIEPGQKVAVVGESGAGKSTLVRLLFRFYDVSQGAIRVDGIDIRDM
TQDALRRAIAIVPQDTVLFNDTLFENIRYGRPDASDAEIWQAIELAHLKQFIEALPQQAQ
TKVGERGMKLSGGEKQRVAIARAILKRSPILIFDEATSSLDSRSERAILKALDEVAKGHT
SLVIAHRLSTVVDADKILVLHQGQLVESGTHDSLLAADGYYARLWRIQHIKQADESVQVQ
H
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccaactctctaccttgaaggtcccgtcgataagctcaactggcaagtgctgaaa
cttctctggccctatctgctggaatataaggggcgcataatgttggcactatcgtgcctt
gtggtgggaaagctcgccagtgtcggcttgcctttcctgttgaagcatttggttgatgat
cttggcggcgaacaaacggcgcagctgttggttgtgcccatagcactggttttagcttat
ggcggcctgaggttggttaatgcgctcacaggggagatcagggataccctctttggccga
gtgaccgagagagcgatacgacgcctgggacttcaggtctttgaacacctgcaccggttg
gatctcggttttcacctcgacaggcgcaccggcggattatcgcgggacatagagcgcggc
accagcggcatcagttttctgatgcgttttatggtgttcaacatagtgcctaccttgttg
gaaatcctgatggtggtggccattttactgtggaattacggtatctggtttgcgctgatc
accttctgctccgtactggcctatggtttgttttctgttgtgacgactgagtggcgtacc
tcttatgtccgtgaggcggcgaaggccgactctgtctccaacacccgcgctatcgatagc
ctgcttaactatgaaaccgtcaaatacttcaacaatgaagcctatgaggcgaatgagtat
gacaaggcgttggcagactgggaggtggccaagcgcaagaatcgcctgtcgttgttcgcc
ctaaatgccggtcaggccaccattattgccattgccatgaccttgatgctggggctggcg
gcttttgaagtgacccgcgggcagatgacagtgggtgactttgtattgatcaacgccttt
atgatgcaactctttatgccgctcaacttcctgggttttgtgtatcgtgaaattcggggc
gctttggccaatatagagaggatgttctcgctgctggataagaccccactggtaaaagac
agtcctacggctaaagccgtatcgctgacagagggcctaatcagttttgactcggttggc
tttggctatggtgacaggcagatactcaagggcgtgagttttgagatagagcccgggcag
aaggtggctgtcgtgggtgaaagcggcgccggtaaatcgacgttggtgcgcttgttgttc
cgcttttacgatgtcagccaaggagcgattcgagtcgatggtatcgatattcgcgatatg
acccaagatgcactgcgccgagccattgccatagtgcctcaggacactgtgctgtttaac
gatactctgtttgagaatattcgctatggccgccccgatgcttcggacgccgaaatctgg
caggcgatagagttggcccacctgaagcagtttattgaggcattaccgcagcaggcccag
accaaggtgggtgagagaggcatgaaactctccggcggtgaaaagcagcgagtggcaatt
gccagggcgatattgaagcgctcgccgatactgatcttcgatgaggccacctcatcactg
gacagtcgctccgagcgggcgattctcaaggcgctcgacgaagttgctaagggccatacc
agcttggtgattgcccataggttatcgacagtggtggatgccgataaaatcttagtgttg
catcaaggtcagttggttgagtccggcacccatgacagcctgttggctgccgatggatat
tatgctcgtttatggcggatccagcacataaaacaggctgatgagtcggtgcaagttcag
cattga
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