Shewanella carassii: TUM17387_30560
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Entry
TUM17387_30560 CDS
T07543
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scaa03009
]
TUM17387_30560
Enzymes [BR:
scaa01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
TUM17387_30560
Ribosome biogenesis [BR:
scaa03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
TUM17387_30560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
BCV67697
LinkDB
All DBs
Position
3446686..3447399
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AA seq
237 aa
AA seq
DB search
MRLAHYLAQTGLCSRREAARRIEAGEIFLGDKLAKHTDRVTLVAGQRHCLEKLFYRGEPI
SLPEPYTYLLFNKPVGIDCRLLKNDPSSLLHLLPQDKRLYPAGRLDKDSRGLLLLSNDGE
LTHKLMHPDFCHSKCYRVTVERAFTDEFIHTLRSPMDYGHGQVCSSQVTPVSANSFEIIL
TQGKKRQIRRMCRHLGYRVIDLCRTGIMTLTLDHLAEGEFRQLNQDEITTLRQLCQN
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcgctcactatctggcgcaaaccggcctctgttcaagacgtgaagctgccagg
cgtatcgaagccggggagatttttctgggtgacaaactcgccaaacacacagacagagtc
accctggtagccgggcagcgccattgtctcgaaaagctgttttatcgaggtgaacccata
tccctccctgagccgtacacctatctgttattcaataaacccgttggcatagattgccgc
ctgctcaagaatgaccccagcagcctgttgcatttattgcctcaggataagcggctgtat
ccggccggaagactggataaagactcccgtggcctgttactgctcagtaacgatggtgag
ctgacccataaattgatgcacccggatttctgccacagcaagtgttaccgggttactgtg
gagcgggcatttactgacgagtttatccataccttgagaagcccgatggattacggtcat
ggccaggtgtgctcatcacaggtcacgccagtttcagcaaacagttttgaaattattctg
actcagggtaagaagcggcaaattcgccgcatgtgtcggcatttaggttacagagtcata
gatctttgccgcaccgggataatgactctaacgctcgaccaccttgccgaaggggaattt
aggcagctgaatcaagatgaaatcaccactctcaggcagctgtgccaaaactga
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