Shewanella carassii: TUM17387_30990
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Entry
TUM17387_30990 CDS
T07543
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaa02000
]
TUM17387_30990
Transporters [BR:
scaa02000
]
Other transporters
Pores ion channels [TC:
1
]
TUM17387_30990
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BCV67740
LinkDB
All DBs
Position
complement(3492802..3494799)
Genome browser
AA seq
665 aa
AA seq
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MKRKSYYPILPLMLVSPLAFANGSGVEPEKKTDTKIERISVWGSPIAANQDSVNQDTIKM
LNKQNVAEALNIIPGVSLQKSGRRNELQVKVRGFNSKQVPLFFDGVPIYIPYDGNLDLGR
FLASDLASVEVSKGYASLLQGPNMMGGAINLTTRRPEKEFEGQVSASQGWARGEDNGYSL
DASLAGSNDWGFIQLSGNKLNKDFVGLSHDNGNPIAGSDGKRANSAYSDRRGTAKFGLTP
NETDEYIFTYIRQEGEKNSPPYAGTEAYVRPMYWQWPQYDKQSFYYSGYSQLTPGVVLHS
RLYRDEFENTLRIYKSLKNLQQRKGPYSHYDDASNGAGLQLSIDMRKEDMLSFATHWKED
LHKEQGKPDGEFDKYKDRTLSAAVEYQWALRDNLDLVGGISYDSRKSLEGYKYEKDGSLT
RYEDNSQNAFNWQVMGRYELDNLDTLQLSLSQRSRFPTLKERYTTFRPAFGQTAIVNPHL
EPERATNLELSYKASLPLDWQLDSSVYYNRVSDAILTHNITPTLIQNRNSGRVDYSGLDL
GLYGDISDWASVGLSYSYIHADVKDEQLDVTGLPEHQVFAWVKLTPFDALDIVVSQEARS
DSLSSSRGTQVASGFGVTGVRFDYRVWQGLSVNASVNNLFDRDYAYTEGFPEEGRNYWLG
MEYSF
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgaaagagttattaccctattttgccgctgatgttggtttcgccattggcattt
gccaatggcagtggtgtcgagcccgagaagaaaaccgacaccaaaatcgagaggatcagc
gtttggggtagcccaattgccgccaatcaagacagcgtcaatcaagacaccatcaagatg
ttgaataagcagaacgtggctgaggcgctgaatattattcccggagtcagtctgcaaaaa
tccggtcgccgtaacgagttacaggttaaggttcggggttttaacagtaagcaggtaccg
ttgtttttcgatggggttccgatttatatcccctatgatggcaatctggacttagggcgg
tttctggcctcggatctggcctcggtggaagtctccaagggatatgcctctttgctgcag
gggccgaacatgatgggcggtgccatcaacctgacaacccgtagaccggaaaaggagttc
gaagggcaagtcagtgcttctcagggttgggctcgaggcgaagacaacggttatagcctg
gatgctagcctggccggcagcaatgattggggctttatccaattgagtggtaacaagctg
aataaagactttgtcggcctgtctcacgataatggcaatccaattgccggtagtgatggc
aaacgcgccaactcggcatacagtgaccgtcgtggtaccgccaaatttggcctgacaccc
aatgaaaccgatgagtacatctttacctatatccgccaggaaggggagaagaatagcccg
ccttatgccggcactgaagcgtacgttcgtccaatgtattggcaatggccgcaatatgat
aagcagagtttttattacagtggttacagtcagctcactccgggagtggtgttacacagt
cgtctctatcgcgatgaatttgaaaacacattgcggatctacaagagtttgaaaaacctg
cagcaaaggaaagggccttacagtcattatgacgatgccagcaatggcgcaggtttgcag
ctcagcatagatatgcgcaaggaagatatgctgtcgtttgccactcactggaaggaagat
ctgcacaaggagcaagggaagccagatggtgagtttgataagtacaaagaccgaactttg
tcggcggcggtggagtatcaatgggcgctgagagacaatctggatctggttgggggcatc
agctatgactcccgcaagagtctggaaggctacaaatatgagaaggacggcagtctgact
cgctatgaggataactcacagaatgctttcaactggcaggtgatgggccgttatgaactg
gataatctggatacactgcagttgtctctgtctcagcgtagtcgctttccaaccttgaaa
gaacgctacaccaccttcagacccgcttttggccaaacggcgatagtgaatccacatctg
gagcctgagcgggcaactaacctggagttgagctataaggcctcattgcctctcgactgg
cagttggacagcagcgtctattataaccgggtgtcggatgccattttgacccataacatc
accccaaccctgatccaaaaccgcaacagcggtcgggtcgactatagcgggctggattta
gggctttatggcgatatcagcgattgggccagtgttggcctgagctacagctatattcat
gccgatgtgaaggatgagcagctcgatgtcaccggcctgccggaacatcaagtctttgcc
tgggttaagttgactccgtttgatgcactggacattgttgtcagccaagaagcgcgcagt
gatagcctcagcagttccagaggcactcaagtagccagtggttttggcgtcaccggtgtt
cgtttcgactaccgtgtctggcaggggctgagtgtcaacgcctcggtcaataacctgttt
gatcgtgattacgcttacaccgaaggtttccctgaagagggccgtaactattggttgggc
atggagtacagcttttaa
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