Shewanella carassii: TUM17387_32130
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Entry
TUM17387_32130 CDS
T07543
Name
(GenBank) ABC transporter permease
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaa02000
]
TUM17387_32130
Transporters [BR:
scaa02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
TUM17387_32130
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_21
AAA_29
RsgA_GTPase
AAA_16
AAA_30
AAA_28
AAA_25
AAA_5
MMR_HSR1
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BCV67854
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Position
complement(3638812..3640614)
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AA seq
600 aa
AA seq
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MSAPQIASARILPWILSFLKPYRLRVALALLFLLLGSLAWLALGQGVRLIVDEGFMADNS
GRLNEIVLLILGITLVSAVAVFCRFYLMTWLGEKVSNDIRRLVYHRLLEQSPVFFARLRT
GEIISRFTADSTLLQTVIGSSLSMALRSSVTTIGGLVMMAFTSIKLTALVLLAVPLVLVP
VGLLGRRVRKLARTSQDSVADLGAYVDETLHEIHTVQSYGHEARDRDNFDGYLAAVMRAA
SGRIRYRSALISSVMLLTIGAIVAVTWVGARDVMAGVVSAGELSAFMFYAMMVAGAVATI
SEVIGDIQRAAGASERLMELAESKANIAEPAKPLALPSPLKGELRIEQLSFAYDEGAAVL
EDLNIHIQPGERVALVGPSGAGKSTLFQLLQRFYQPSCGRILLDGVDIASVSLASLRAQF
ALVPQESVIFATSVLENVRYGRPEASLEEVVAACKGARAHEFISEFAQGYNTYLGERGVR
LSGGQKQRIAIARAILARRPLLLLDEATSALDAVSEVKVKQALDELMAGRTTLIIAHRLA
TVLNADRILVLERGRLLASGSHNELMQTSPLYREFASLQLLAPDSLASGSNEPGQASSLA
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
ttgtctgctcctcaaatcgcttcggctcggatcctgccctggatcctgagctttcttaag
ccctatcgtttgcgggtcgccctggcgctgctgtttctgctgctggggtcactggcctgg
ctggccctgggacaaggggttcgcttgatagtggatgagggctttatggccgacaactcg
ggtcgcctcaacgaaattgtattgcttattctggggatcaccctggtcagtgccgtggcc
gtgttctgccgcttttatctgatgacctggctcggtgagaaagtcagcaacgatattcgc
cgcttggtgtatcacaggttactggaacaaagcccggtgtttttcgcccgcttgcgcacc
ggggagatcatctcccgctttaccgccgacagtactctgttgcagacagttataggttct
agcctgtcgatggcactgagatcttcagtgaccactataggtggcttggtgatgatggct
tttaccagcatcaagctcacggccttggtgctgctggccgtgccgctggtgttggtgcct
gtgggcttactcgggcggcgggtacgcaagcttgcgcgcaccagtcaggacagtgtcgcc
gatctcggcgcctatgtggatgaaaccttgcatgagatccacacggtacaatcctatggt
cacgaggctcgcgatcgcgataattttgacggctacctggcggcggtgatgcgtgctgcc
agtggccgcatccgctatcgctcggcgttgatctcctctgtcatgttgctgactatcggt
gccatagtggctgtgacctgggtgggagccagagacgtaatggccggtgtggtcagcgcc
ggtgagctgtcggcattcatgttttacgccatgatggtggccggcgccgtggccaccata
agcgaagtgataggggatattcagcgggctgccggtgccagcgaacgcttgatggagctg
gccgagtccaaggcaaatattgccgagccggccaagccgctggcgctgcccagtccgctc
aagggagaactcaggatagagcagctgagttttgcctatgatgagggcgcagctgtgctt
gaggatctcaatatccatattcaacccggtgaacgggtggctctggttgggcccagcggc
gccggcaagagtacgttatttcagctgctgcagcgcttctatcagccgagttgtggccgc
attctgctcgatggcgtcgatatcgcttctgtatcattggcgagcctgagggcacagttt
gccctggtgccccaggagtcggtgatcttcgccaccagtgtgctggaaaatgtgcgttat
ggccgcccggaggccagcctggaagaggtggttgccgcctgtaagggcgccagagctcat
gaatttatcagtgagtttgcccaggggtataacacctatttgggtgagcgtggcgtgcgc
ctttccggtggtcaaaagcagcgaattgccattgcccgcgccatcttggcccgcaggcct
ttactgctgctcgatgaagccaccagtgccctggatgcggtcagtgaagtcaaggtcaag
caggctttggatgagttgatggcgggacgaaccacgctcattatagcccacaggttggcg
acagtgctcaatgctgaccgtattctggtgctggagcgggggcgattattggccagtggc
agccacaacgagttgatgcaaaccagcccgctgtaccgtgagtttgccagtctgcagttg
ctcgcgcccgatagtctggccagtggctcaaacgagcccgggcaggcatcatcgctggct
tga
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