Shewanella carassii: TUM17387_32490
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Entry
TUM17387_32490 CDS
T07543
Name
(GenBank) tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scaa03016
]
TUM17387_32490
Transfer RNA biogenesis [BR:
scaa03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
TUM17387_32490
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Ortholog
Paralog
GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
3HCDH_N
ELFV_dehydrog
Spermine_synth
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
BCV67890
LinkDB
All DBs
Position
complement(3682137..3682970)
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AA seq
277 aa
AA seq
DB search
MQDTDTDLLNSEAYQQRFGGIARLYGVAALAAFAKAHVMVIGIGGVGTWVAEALARSGIG
HISLMDLDDVCVTNTNRQIHALADTIGESKVAVMAQRIKAINPLCRVDEIEDFIAADNLS
QYLSQDKGIDFVVDCIDAVKPKAALIAWCKRNKIKLVTVGGAGGQIDPTQIQQTDLAKTF
QDPLLAKVRNLLRKEYGFTKNPQRRFAIDAVFSSEHLKYPQSDGSVCASKAGAQGNMRMD
CASGFGAATMVTGSFGFVAASRVLARLAQAADSNGQE
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatacagacacagacttgttgaattcagaggcctatcaacagcgttttggcggt
attgcccgtctatatggtgttgctgcgctggcagcctttgccaaggcccatgtgatggtg
atagggattggcggcgtcggcacttgggtggccgaggcgttagcccgcagtggcataggg
catatcagcctgatggatcttgacgatgtctgtgtcaccaataccaaccgccagatccat
gctttggcagataccataggtgaatccaaggtggccgtaatggcacaaaggattaaggcg
attaatcctttgtgccgggtggatgaaatcgaagactttattgctgcggacaatctgagt
cagtatttgtcacaggataagggcatagactttgtggtggactgcatagatgcggttaag
cccaaggcggccttaatcgcctggtgcaaacgtaataagatcaagttggtgacagtgggg
ggagccggcggccagattgatcctacccagatccagcaaacagatttagccaagacgttt
caagaccctttgctggccaaggtacgtaacttgctgcgtaaagagtatggttttacaaag
aacccgcaacggcgttttgccatagatgcggtgttttccagcgaacatcttaaatacccc
cagagtgatggcagtgtttgtgccagtaaggccggggctcaaggcaatatgagaatggat
tgtgcctcggggtttggtgctgcgaccatggtgaccggtagttttggtttcgtggccgcc
agccgggtactggcgcggttagcgcaagctgccgatagcaacggccaggaatga
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