Shewanella carassii: TUM17387_33670
Help
Entry
TUM17387_33670 CDS
T07543
Symbol
ttrR
Name
(GenBank) DNA-binding response regulator
KO
K13041
two-component system, LuxR family, response regulator TtrR
Organism
scaa
Shewanella carassii
Pathway
scaa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
TUM17387_33670 (ttrR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
scaa02022
]
TUM17387_33670 (ttrR)
Two-component system [BR:
scaa02022
]
LuxR family
TtrS-TtrR (tetrathionate respiration)
TUM17387_33670 (ttrR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
GerE
Sigma70_r4_2
AAA_13
Sigma70_r4
DIOX_N
HTH_40
Motif
Other DBs
NCBI-ProteinID:
BCV68008
LinkDB
All DBs
Position
3835904..3836500
Genome browser
AA seq
198 aa
AA seq
DB search
MTNVTDTVLYLVDDDAAVRDSLSFMLSQFGYQLQAFACGQEFLNNAKLTGPGCVILDSRM
PELTGEQVQQKLLEANSPLGIIFLTGHGDLPMAVNAFRQGACDFFQKPVAGKALAAAIEK
AFDYSLKTHEQQQLQQKYATLTEREQQVLQLLVQGMTNKQMSEALYLSLRTIEVHRAKIM
KRLGVHSIAELIKFTPLA
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaatgtaactgacaccgtactttatctggtggacgatgatgctgccgtccgtgac
tcgctcagttttatgctcagccaatttggttaccaactgcaagcctttgcctgtggccag
gagtttctcaataacgccaagctgacggggccgggttgtgtcattctcgatagccgcatg
ccggagctcacgggagagcaggtacagcaaaaactgctggaagccaacagcccgctgggg
atcatctttcttaccggtcatggcgatctccccatggcggtcaacgccttccgccaggga
gcctgcgactttttccagaaacccgttgccggcaaggcactggctgcggccatcgaaaag
gcgttcgactacagcctcaagacccatgaacagcaacagctgcagcagaaatacgccacc
ctaaccgaacgcgagcagcaggtattgcagctcttggtgcaagggatgaccaacaaacag
atgtccgaggccctctacctgtcactacgtaccatagaagtgcatcgcgccaagatcatg
aagcggctcggtgtccacagcattgccgaactgatcaagttcactccgctggcataa
DBGET
integrated database retrieval system