Shewanella carassii: TUM17387_33830
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Entry
TUM17387_33830 CDS
T07543
Name
(GenBank) Na+/H+ antiporter
KO
K18218
tetracycline resistance efflux pump
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaa02000
]
TUM17387_33830
01504 Antimicrobial resistance genes [BR:
scaa01504
]
TUM17387_33830
Transporters [BR:
scaa02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
TUM17387_33830
Antimicrobial resistance genes [BR:
scaa01504
]
Gene variants
Tetracycline resistance genes
Transporters
TUM17387_33830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Na_H_antiporter
HAD_RAM2_N
Astro_1A
DUF6520
Motif
Other DBs
NCBI-ProteinID:
BCV68024
LinkDB
All DBs
Position
complement(3851630..3853210)
Genome browser
AA seq
526 aa
AA seq
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MNIMHFADSPWSIVPPLLAVALAIITRRVLLSLGVGIVVGSLMLQQFSPLQSLRYLVDSV
LKIFWVDGAPNSDNLNMLLFMLLLGGLISLMTASGATRAFAEWAARRCQSRKGAKSLTGL
MVFAFFIDDFFHSLSVGPICRPVTDRFQISRAKLAYLLDSTAAPVCVLMPISSWGAYIIA
LVGGILVAHGVTEQSPIAAFVQMIPMNLYAVFTLIMVVVVIAFQLDIGPMRQHEQRALEG
KLWDESKGRPIGLDMEAPADSRGGMLDMVLPIVTLTAASIYFMLDSGAQVLAANGQAFSV
LGAFEHTNVGSSLVYGALCSLAVSGLLALRLGLGIATWLRAAPRGVMAMLPAINILLFAW
TIGAVVRDMETGKYLASLANGNLPTGLLPVVVFVLSCAMAFATGTSWGTFGIMLPLAGDM
AAASDIQLLLPMLSAVLAGAVFGDHSSPISSTSILSATGAGCHHIDHVLTQLPYALTVAF
GAALGYLAMGLLHSTLAGFLVSAAWFALFCLYHARRFQAAPEAAIG
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcatgcattttgcggactctccctggtccatagttcctcctctgctggcggtt
gcgctggcgatcatcacccgtagagtactgctctcccttggggtaggcatagtcgtcggc
agcctgatgttgcagcagttttcaccgctgcaatcgctgcgctacctggttgacagtgtg
ctgaaaatcttctgggtcgatggtgctcccaacagcgataacctgaatatgctgctgttt
atgctgctgctgggtgggcttatcagcttgatgaccgcctcgggtgcgacccgggccttc
gccgaatgggccgccaggcgctgccagagccgcaagggcgccaagtcgctcaccggcttg
atggtgtttgccttttttattgacgacttcttccacagcctgtcggtggggcccatttgc
cgccctgtgaccgacagattccagatctcccgcgccaagttggcctatctgctggactcg
actgcggcgcccgtatgcgtattgatgcccatctcctcctggggggcctatatcatcgcc
ctggtgggcggcatactcgtggcccatggggtgacagagcagagcccgatcgccgccttt
gtgcagatgatccccatgaatctctatgcggtatttaccctgatcatggtggtggtggtc
atcgccttccaactggatattgggccgatgcgacagcatgagcagcgggcgctcgaaggc
aagctctgggatgaatccaagggccggccaatcgggctggatatggaagccccggccgac
agccgcggcggcatgctggatatggtgttgccgatagtgacactgacggcggcgagtatc
tatttcatgctggactccggggcccaggtattggccgccaatggtcaggccttcagcgtg
ctgggagcctttgaacataccaatgtgggctcatctttggtttatggcgccctttgcagc
ctggcggtgtccggcctgttggctctgcgtctcggccttgggatcgccacttggctgcgc
gccgcccccagaggcgtcatggccatgttgccggcgatcaacatactgctgtttgcctgg
accataggcgccgtggtgcgtgacatggaaaccggcaaatatctcgccagcctggctaac
ggcaacctgcccacagggctgctgcctgtggtggtgtttgtgctctcctgcgccatggcc
tttgccacaggcaccagttggggcactttcggtatcatgttgccactcgccggagatatg
gccgccgccagcgatatccaactcctgctgcccatgctgtcggctgtgctggccggtgct
gtgtttggcgaccacagttcgcccatctccagtaccagtattctgtcggccaccggcgcc
ggctgtcaccatatagatcatgtgttgacccagttgccttatgccctgaccgtcgccttc
ggggcagcactgggttatctggccatggggctgctgcattccaccctggccggtttcctg
gtgagtgccgcctggtttgcactcttctgcctctatcacgccaggcgcttccaggcggct
cccgaggccgccatcggctga
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