Shewanella carassii: TUM17387_34140 Help Entry TUM17387_34140    CDS       T07543                                  Symbol mshQ Name (GenBank) MSHA biogenesis protein MshQ   KO K12287   MSHA biogenesis protein MshQ Organism scaa  Shewanella carassii Brite KEGG Orthology (KO) [BR:scaa00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:scaa02044]     TUM17387_34140 (mshQ) Secretion system [BR:scaa02044]  Type II secretion system   MSHA pilus biogenesis protein    TUM17387_34140 (mshQ) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF6701 Bact_lectin DUF7305 DUF2572 Ice_binding Lectin_leg-like Motif Other DBs NCBI-ProteinID:  BCV68055 LinkDB All DBs Position complement(3886849..3890304) Genome browser AA seq 1151 aa AA seqDB search MNSRILLLLGILLGAWPMTAFAVPLCSDIFTDPPSGNHLNDGFVPPPNLPPTQGVLHCPY NGTFCSQPLAAGDINFSHGSFFHGRFLYPTTTTTRLYFDSLTLNNATLNPGGKAENLIIY VRGSLDITGQNTVNAIIYVAGSVKVAGGASISGAMASGGALDIKGNSDVNIDLGAVEEAD FGGMCSNEPTPVLGCFSDDFRAASLSMDDWATKVLGYSVTPHIVDGRLRLTQARGNQATS STYQRLFPAEGNLVTVEFDYYSWSPQSGTGGDGVAVILSDAAVTPQPGSFGGALGYAQRN DGTPGFAGGWLGVALDEYGNFSNPIEGRVGGPGFRRQSVSIRGAEAGAYRYLNGTGAYIT PRIDVRGTQYPAPGHRYKLTLDSRRVGTTMVSVERDIGNGYQKLVDSFNVRRFWGQSRVP EDFYLSFTGSTGDAYNNHEIDNFKVCALESKPVGEQVHHFEFDYSASPFTCRAEPITLRA CKNASCSQLFTGTVTANLSPNPVGNGRWLPASSVTFNGGSTQIQLQKFDLWPLTLGVSSS TPATRPGSDTLCRSGNGPLSTAACRLSFASSGFIFEVADKLANKPETSVLVKAMKSDGTA QCVPAFANTYKTLAFWSDPLSAVVGSPKVALKQTGAWRWQEIGNNQTIAMPLTLAFDSQG QSRIDVNYPDAGRVELNALYRGSSRGGDAGLVMHGADDFVSFPLGFCVEAEQYCQAADAS CAPFRRAQENFPLSISAKAWSEYGNTNLCNNPTTPSYQQAGLSLWHKLIAPASGQAGELQ LQQYDHLRQQTPENNRLAQAVSEVGVFEFGVTAPLPYEGSVAFPSLVGSRYWQGPSGKTA TPVGRFVPAFFRVDDANLLPACYGFSYMDQPFDVRYSVSALSLDRQLTRNYFGDFAKAYS RYQAANQLDGVALDSRVFGGEIFADSWNQGQAAFRGQLKFARKGPLQADGPFPLLDIGLE VRDPDKIAKLLDSDMQSNFIGDCAVGGNCSAVRLGSQQMRHGRLALENTFGPENQTLNMA ARTEYWDGSGWRLNDLDNCSVFNTSLESQLDLPALGYQFEPGLSAGQYVSRFSYSGNYVR AERGEFELLWRALGSSAYRGKVTAPLKVPEWLQWYWNWNGLNDGALSDPRASVFFGRYRG NDRIISWREVN NT seq 3456 nt NT seq  +upstreamnt  +downstreamnt gtgaatagtcgcatactgctgttactcgggatcttgcttggcgcttggcctatgacggcc tttgccgtgcctctttgcagtgatatttttaccgatccgcctagtggtaaccatctaaat gacggttttgttccgccccccaatctgcctccaacgcagggggtgctgcattgtccttat aacggcacgttttgtagtcagcccctggcggccggcgatattaattttagtcatggcagt ttttttcatggccgctttctgtacccaaccacgaccacgaccaggctctatttcgatagt ttgactctgaataatgccaccctgaacccaggaggaaaggctgagaacctgatcatctat gtgcgcggttcgttggatattaccggacaaaatacggtgaatgccatcatctatgtggca ggctcggtcaaagtagccggtggggcttccatcagcggtgccatggcttcaggcggggcc ttggacatcaagggcaactcggatgtaaatatcgacctcggtgccgtcgaagaggccgat ttcggtggcatgtgtagtaatgagccaacgccagttttaggttgtttcagtgatgacttc cgggcggcttcgctgtcgatggatgactgggctaccaaggtgctggggtattcggtgacg ccgcacatagtcgatggccgtttgcgtctgactcaggcgcggggcaatcaggccacttcc agcacttatcagcgcttgtttccggccgaaggcaacctggtcacggtagagttcgattat tactcttggtcgccccagagtggcaccggcggagatggggtggcggtgatcctctcggat gcggccgtgacgccgcagccgggcagtttcggtggcgccttggggtatgcccagcgtaat gatggtaccccggggtttgccggtggctggctgggggttgctctggatgagtacggtaat ttttccaacccgatcgaagggcgtgtgggtgggccgggttttcggcgtcaatctgtgtcc attagaggtgcagaggcgggcgcttatcgttatctgaatggcaccggggcttacatcacc cccaggatagatgttcgaggcactcagtatcccgccccagggcacaggtataagcttact ctcgactctcgtcgggtgggtaccactatggtgtctgtcgaacgagatataggaaacggc taccaaaagttggtggactcattcaacgtgcgccgattctgggggcaaagccgggttccg gaagatttttacctgtcatttaccggctctaccggtgatgcctacaacaaccatgagatc gacaatttcaaggtttgtgccctggagtcaaaacccgtgggcgaacaggtgcatcatttt gagttcgattacagcgcctcaccttttacttgccgtgccgaacccatcaccttgagagcc tgtaaaaatgccagttgttcgcaactctttaccggtacagtcacggcgaatttgagcccg aatcctgtcggcaacgggcgttggttaccggcaagttcggtcaccttcaacggtggcagt acccaaattcaattgcagaagtttgatctatggccgctgactctgggggtttcctcctcg actccggccacccgccccggtagtgataccctttgccgcagtggcaatggtcccttgagt acggcggcctgtcgcctgagttttgcttccagtggtttcatctttgaggtggctgataag ctggccaacaagccagagacgagcgtgcttgtgaaggcaatgaagtctgatggcacggct caatgtgtgccggcctttgccaatacctacaagaccctggctttctggagtgacccccta tcggcggttgtcggttcccccaaggtggcgttgaagcagacgggagcctggcgttggcag gagatcggcaataatcaaaccatagccatgccgttgaccttggcctttgacagccagggg cagagccgaatcgatgttaactatcccgatgctggccgggttgagctcaatgccctttat cgtggcagtagcagaggcggggatgccggattggtgatgcatggcgccgatgattttgtc agcttcccgttggggttctgtgtcgaggccgagcaatactgtcaggcggctgatgcttcc tgtgcgccttttcggcgagcgcaggaaaatttcccactcagcatcagcgccaaggcttgg tctgagtatggtaataccaatctctgcaataaccccaccacaccatcctatcagcaggca ggtctctccttatggcataagctgattgccccggcatcgggtcaagcgggtgaactgcaa ctgcagcagtatgatcatctgcgccagcaaacgcctgagaataatcggcttgctcaagcg gtcagtgaggttggggtgtttgagtttggggtcacggcgcccttgccctacgagggcagt gtggccttccctagcttggtgggcagcagatactggcagggaccgagtggcaaaactgca acgccggtcgggcgctttgtgccggcctttttccgtgtcgatgacgctaatttgctgccg gcctgttatggtttcagctatatggatcagccctttgatgtccgttatagcgtcagtgct ctgtcgctggataggcagttaacccgaaattatttcggtgactttgccaaggcttacagc cgttatcaggcggcaaatcaactcgacggagtggccctggatagtcgggttttcggtgga gagatattcgcagatagctggaaccaaggtcaggcagcgtttcgcgggcaactcaagttt gcccgcaaggggccgttgcaggctgatggacctttcccactcttggatataggcctggaa gtgcgggatccggacaagattgccaagttgctggacagcgatatgcaaagtaacttcatt ggtgattgtgccgtggggggcaactgcagtgccgtgcgtcttggtagtcagcagatgcgc catggtcgcctggcgctggaaaatacctttggcccggaaaatcagaccttgaatatggcg gcgcggacagagtattgggatggcagcggctggcgcctgaatgacctggataactgcagt gtgttcaatacgtcgcttgagtctcaactggatttgccggcactgggttaccagtttgaa cccggactcagcgccggtcagtatgtgagccggtttagttatagcggtaattatgttcgc gccgagaggggcgagtttgaacttctgtggcgggcactcggcagctcggcttatcgcggt aaggtgacggctcctctcaaggtgcccgaatggttgcaatggtactggaattggaatgga ctcaatgatggcgctcttagcgaccccagagccagcgtcttctttggccgctatcgcggc aatgacaggatcataagctggcgtgaagttaactga

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