Shewanella carassii: TUM17387_34660
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Entry
TUM17387_34660 CDS
T07543
Symbol
speC
Name
(GenBank) ornithine decarboxylase
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
scaa
Shewanella carassii
Pathway
scaa00330
Arginine and proline metabolism
scaa00480
Glutathione metabolism
scaa01100
Metabolic pathways
scaa01110
Biosynthesis of secondary metabolites
scaa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
TUM17387_34660 (speC)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
TUM17387_34660 (speC)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
TUM17387_34660 (speC)
Enzymes [BR:
scaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
TUM17387_34660 (speC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
BCV68107
LinkDB
All DBs
Position
complement(3936116..3937291)
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AA seq
391 aa
AA seq
DB search
MSQFQSIDVADYYDNETFERIKAFASDKVTPFVVIDTKIIAKQYDDMVQSFPFASVYYAV
KANPAPEILSLLRDKGANFDIASIYELDMVMELGVSPERISYGNTIKKRKDVRAFYQRGV
TMFASDSEADLRMIAEEAPGAKVYVRILTEGTETADWPLSRKFGCQNEMAYELLVLAKAL
GLKPYGLSFHVGSQQRDIGAWDAAIGKVKVIFDRLKEEHGIVLEMINMGGGFPANYIDKT
NSLTTYAEQIIHFLKEDFGEQLPKIVLEPGRSLIANAGVLVSEVVLISRKSNTALERWVF
TDVGKFSGLIETMDEAIKFPIYTEAQGELQPCVIAGPTCDSADIMYEQYSYGLPEELAIG
DRLYWLTTGAYTTTYSAVCFNGFPPLQDYYL
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatttcaatctattgatgttgctgattactatgacaatgaaacctttgagcgt
atcaaagcttttgccagtgataaggtgacaccttttgtggtgatagataccaagatcatc
gcgaaacagtatgatgatatggtgcagagctttccctttgccagcgtttattatgcagta
aaggccaacccggcacctgagatcctcagcttgctgcgtgataagggcgccaattttgat
atagcttccatctatgagctggatatggtgatggagttgggtgtttcccccgagcggata
agctatggcaataccattaaaaaacgcaaggatgtcagagccttctaccagcgtggcgtg
actatgtttgcctctgactcagaggccgatctgcggatgattgccgaagaagcccccggg
gccaaggtctatgtgcggatcctcaccgaagggacagaaaccgccgattggcctttgtcg
cgtaagttcggctgccaaaatgagatggcctatgagcttttggtgctggccaaggcgttg
gggttaaagccttacggcttgtcgttccacgtgggctctcagcaacgggacatcggggct
tgggacgcggctataggcaaagtgaaggtgatctttgaccggctcaaagaggagcacggc
atagtgctggagatgatcaatatgggcggcggctttccggccaactatatcgacaagacc
aatagtctcaccacttacgccgagcagatcattcacttcctcaaagaggattttggtgag
cagttacccaagatagtgttggaacccgggcgctccttgattgccaatgccggtgtgctg
gtctctgaggtggtattgatcagccgcaagtccaacacggcactggagcgctgggtattt
accgatgtcggtaagttttccgggctgattgagactatggacgaagcgattaagtttccg
atttacaccgaggctcaaggggagctgcaaccttgtgtcatagccgggcctacctgtgat
agcgccgatatcatgtatgaacagtacagttacggtttgccagaggagctagccataggt
gacagactctattggttgaccactggcgcttataccaccacctattcggcggtgtgcttc
aatggttttccccccttgcaagactactatttataa
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