Shewanella carassii: TUM17387_35160
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Entry
TUM17387_35160 CDS
T07543
Name
(GenBank) biopolymer transporter TonB
KO
K03561
biopolymer transport protein ExbB
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaa02000
]
TUM17387_35160
Transporters [BR:
scaa02000
]
Other transporters
Pores ion channels [TC:
1
]
TUM17387_35160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MotA_ExbB
FlaX
DUF3450
Borrelia_REV
Motif
Other DBs
NCBI-ProteinID:
BCV68157
LinkDB
All DBs
Position
4003532..4004860
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AA seq
442 aa
AA seq
DB search
MSLLSSLTRQSMMRPALLWALSLLSLSLSLPCQAESLQQVLEQVRSGSRQEQAAAERQEN
LSRQSLEQVRGNHKKLQQQLTRTQANNLELEDQLLALQQSLKDKQAQLNAEKASLDGVFR
AIQEHEQLLLTTVAPHSLWRHDSSGLAEIPTDQLGLQRLQALWTALTEQSVLAAKPIVQS
SEGLNADGTPVLLNVTEYGPFNALSDKGWVRYLPAQQSWQLLAEQPKLSPTQGSVWLDPS
FGKLLQQAANANGWFDKLKPAGIVGVFIGLIALIASGIALNRLWILRREKRRLTQQQASQ
QVKSDNALGRVMLAATDCPEEQLEARLNAAVLSEVPRLTRGTGTLAVLAGIPPLLGLLGT
VGGMIETFDVITRFGSNNTELLSGGIAEALLTTQLGLMTAIPLLLLHCAVKSQSRQLTQM
LEQEAAALVVLQRFGDTGNPGQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagtttattgtcttccctcactcgccagagcatgatgcgtcccgcattactgtgggcg
ctatcgctgttgtcgctctcattatccctcccctgccaggccgagagtctgcaacaggtg
ctggagcaggttcgcagtggcagtcgccaggaacaagcggccgccgagcggcaagagaac
ctgagccgtcagagcctggagcaggtgcgcggcaaccataagaaactgcagcagcaactc
acccggactcaggcaaataacttggaacttgaagaccaactgctggcactgcagcaaagc
cttaaggacaaacaggcccagctcaacgccgagaaagccagtctcgacggggtgtttcgc
gccatccaggaacatgagcagttgctgctcaccacagtggcaccccacagcctatggcgc
cacgacagcagtggccttgccgagatacccactgaccaacttggcctgcagcgactgcag
gcgctttggaccgcattgacagaacaaagcgtattggcagccaaacccatagtgcaaagc
agcgaaggcctcaatgccgatggcaccccagtgctattgaatgtcaccgaatatgggcct
tttaatgccctcagcgataaaggctgggtacgctacttgccggcgcagcaaagctggcaa
ctgctggctgagcagccaaagctatcgcccacccaggggagtgtctggctcgacccctcg
tttggcaagttgctgcaacaggcggcaaacgctaacggctggttcgacaagctcaaaccg
gcagggatagtcggcgtctttatcggcctgatagccctgatagcctcaggcatagccctg
aaccgcctgtggatactgcgccgcgaaaaacggcggctgacccaacagcaggccagccag
caagtcaagagtgacaatgccctcggccgggtgatgttggcggcaaccgattgccccgag
gagcaactcgaagcgcggctcaacgccgccgtactcagcgaagttccccgcctgacccgt
ggcactggcaccctggcggtattggcggggatcccaccactactggggcttctgggcacg
gttggtggcatgattgaaaccttcgatgtgatcacccgtttcggcagcaacaacacagag
ctgctctcgggtggcattgccgaggcactgctgaccacccagctgggactgatgacagcc
attccgctgctgttactgcactgcgcggtcaagagccagagtcggcaactgacccagatg
cttgagcaggaagcggctgcactggtggtattacagcgctttggcgacacaggtaacccc
ggtcaatga
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