Shewanella carassii: TUM17387_35380
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Entry
TUM17387_35380 CDS
T07543
Symbol
aggC
Name
(GenBank) ABC transporter
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
scaa
Shewanella carassii
Pathway
scaa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
TUM17387_35380 (aggC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaa02000
]
TUM17387_35380 (aggC)
02044 Secretion system [BR:
scaa02044
]
TUM17387_35380 (aggC)
Transporters [BR:
scaa02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
TUM17387_35380 (aggC)
Secretion system [BR:
scaa02044
]
Type I secretion system
Adhesin protein transporter
TUM17387_35380 (aggC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
Peptidase_C39
AAA_15
AAA_29
AAA
AAA_13
DUF87
AAA_22
AAA_23
MMR_HSR1
SLATT_1
Motif
Other DBs
NCBI-ProteinID:
BCV68179
LinkDB
All DBs
Position
4043643..4045814
Genome browser
AA seq
723 aa
AA seq
DB search
MTASASPKPEQWTISASQRVTVDPLLDSLVLLTEYFGCPCSSESLAAGLPLSSAVLSPEL
VPQAAARAGLTAKLSRKGLNQVTAIQLPCILLLKDKKACILRELDLEQQHAVIQLPETGG
EQRLSIEELETLYVGYLFLVKQQYRGDMGFDVYHHDHSKHWLLQTIKDSAPIYRDALIAS
ILVNLFALVSPLFIMNVYDKVVPNLAFESLWVLAIGAGIAYLFDLVMRQLRSYLIDIAGK
KVDIIVSSRLFYKAIGIPLENRSPSIGGMARQLGEFDSIREILTSATITTLVDLPFALLF
VLIIYLVAGDLALIPLVASLIIIGYTLIVQPRLKTAIEESNKFASLKHGHLIESLASLES
IKSYGAEGLVQKAWQQMIGHTANWQLRSKKLSNSVANVANFVVQLTVVSVVILGVYRVAD
NDISMGGIIAAVMLASRAVAPMAQLANLMTRANQTASALRQLDQIMTQEDEFENKGHLVS
KQRLMGKIEADNLSFSYPSSEKTVLNPFSLRINPGERIAIIGRNGSGKSTLAKLLIGLFK
PSNGSLRYDGIDSAQIHPSDLRRNFGYLPQDVTLFHGSVRDNILFGTRQVTEHQLIRAVQ
LSGVNLFTDMESEGLDQQVGEGGHSLSRGQRQIVALARAILNDPPVLLMDEPTASLDARA
EKQFMRSMHNVSRDRTLIIITHKMHLLNLVDRIIVMDKGHIIADGPKNQVLEKLNQGLMA
GGK
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgcatccgcttctcctaaacctgagcaatggaccatttcggcttctcagcgagtc
acggttgatcccctgctcgatagtctggttctattgacagagtactttggctgcccctgt
tccagtgagtctttggcagcggggcttcctctgtcttctgcagttttatctccggaactg
gtaccacaagccgcagccagagctggtctgacggcaaaactttcccgtaaaggtctgaat
caggttactgccattcagttaccctgtattttactcttgaaagacaagaaggcctgcatc
ctgcgcgagctggatctggagcaacaacatgcggtgatccaattacctgagaccggcggc
gaacaacgcctatctatagaagagttggaaaccctctatgtaggctatctgtttctggta
aaacaacagtaccgtggcgatatggggtttgatgtctaccatcatgaccacagtaaacac
tggctactgcaaaccattaaagactcagcccccatttatcgtgatgccctgatagcctca
attctggtgaatctattcgcgctggtttcaccgctgtttatcatgaacgtctacgataaa
gtggtgcccaacctggcattcgaatcactgtgggttctggctatcggagccggtattgct
tacctgtttgacttggtcatgagacagctgagaagttatctgatcgacattgccggtaag
aaagtcgatatcatagtgtcctcgcgcctgttctataaggcgataggtattcctctggaa
aaccgttctcccagtattggtggcatggcgcgtcagttaggtgagtttgacagcatcagg
gaaatcctcacctcggcaacaataaccacgctggtcgatctgccctttgcattgttgttt
gtgttgataatctatctggttgctggcgatctggcgttgatcccacttgtcgctagcctc
atcatcatcggctataccttaattgttcaacccaggctcaagacagccattgaggaaagc
aataaatttgccagcctcaagcacggccatttgattgagagtctcgcctctctggagtcc
atcaagtcatacggcgcggaaggcctggtacaaaaagcctggcagcagatgataggtcac
acagccaactggcagctgcgctcgaaaaagctttccaactccgtagccaatgtcgccaac
tttgtggtgcaactaaccgttgtcagtgtagtcattctcggggtctaccgggttgccgat
aatgatatatccatgggtgggatcattgccgctgtgatgcttgccagcagggccgttgca
cctatggcacagctggctaatttaatgacccgagccaaccaaactgccagcgcgttgaga
cagctggatcagatcatgacccaagaagatgaatttgaaaacaaaggtcacctggtcagc
aaacagcgtctgatgggcaagattgaggccgataatctcagtttcagttacccaagttca
gaaaaaacggttttaaatcccttttcgttgcgaattaaccctggtgaacgtatcgccatc
ataggccgcaacggcagtggcaagagtaccttggccaaactacttatcggactgttcaaa
cccagcaatggtagcctgaggtacgatggcatagacagcgcccagatccacccgagcgat
ctacgccgtaacttcggctatctgccacaagatgtcaccctgttccacggttcagtcagg
gacaatattctcttcggtacccgtcaggtcaccgagcatcaattgatccgagccgtacaa
ctctcaggagtcaatctgtttaccgatatggaatcagaaggcttggatcaacaagtaggt
gaaggcggacattctctatcccgaggccagcggcaaatagtggccttagccagagccatt
ctcaatgacccgccggtgctgttaatggatgagcccacagccagtttggatgccagggcc
gagaagcaatttatgcgttccatgcataatgtcagccgtgatagaaccctgatcattatc
actcacaaaatgcacttgctgaacttagtggaccgtatcatagtgatggataagggccat
attattgccgatggcccgaaaaaccaagtgcttgaaaagctcaaccaagggctgatggca
ggaggcaagtaa
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