Shewanella carassii: TUM17387_36650
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Entry
TUM17387_36650 CDS
T07543
Name
(GenBank) LysR family transcriptional regulator
Organism
scaa
Shewanella carassii
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_5
MarR_2
HTH_20
HTH_Mga
SBP_bac_3
Motif
Other DBs
NCBI-ProteinID:
BCV68306
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Position
4188217..4189191
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AA seq
324 aa
AA seq
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MGNIIVNLDNLARIDLNLLVILQILLEERSVTRAANRLHLSQSALSKSLNRLREMLGDPL
FQRTAHGLKPTAHAEQLAQHLPIALQSLHQLTQPPVFTPASSNRQFSLAMVESAYETLLP
SFIGRLLNNAPNLRLDSYVWTEKSMQALQQGQIDLGISGRDLQPNSSFHFNQLPEGILYQ
TLFQDHQVCLVRQGHPALQAEKNQVWDLAAYLALPHVQVRCEGNDWWALDYFLAELGHHR
RLSATVPDFYGAASICAHSDLVFTLPSSFALHACKLYSLQQLPLPIDFLPMAYVLLWHER
NNNDPGHRWMRQLIGDSMSDKKTA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
ttggggaatatcatagtgaatctggataatctggctcgtatcgaccttaatctgctggtc
atactgcagatattgcttgaagagcgcagcgtgacccgcgccgccaataggttacatttg
agtcagtcggcattgagcaagagcctcaaccgcctgcgtgagatgctgggcgatcctctg
ttccaacgtaccgcccacggcctcaaaccgacggctcacgccgaacagttagcacaacat
ctgcctatcgccttacagagtttgcatcaactgactcaaccaccggtattcaccccggcc
agcagcaaccggcaattctcgctcgccatggtagaaagtgcctatgaaaccttgttaccc
agttttatcggtcgcttactcaacaatgcgcccaatctcaggctcgactcctacgtctgg
accgagaaatcgatgcaggcactgcaacagggacagatagacttgggaatttcgggacgg
gatctgcagcccaactccagttttcacttcaaccagttgccggaggggatcctgtaccaa
accctattccaggatcatcaggtatgcctagtacgccaagggcatccggccttgcaggcc
gagaagaatcaggtctgggatctagcggcttatctggcactgccccatgtacaggtgcgg
tgtgaaggcaacgattggtgggcgctggactattttctggcggagcttggtcatcatcgc
cgcctgagcgccacagtacccgacttttatggtgctgccagtatttgtgcccacagtgac
ttggtgtttaccttgccctcaagctttgccttgcacgcctgcaagctctactcgttgcaa
caattgccgctgccgatagactttctgcccatggcttatgtgttgctgtggcatgagcgc
aataacaatgacccaggccaccgctggatgcggcagttaattggtgacagcatgagcgat
aaaaagaccgcctga
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integrated database retrieval system
