Shewanella carassii: TUM17387_36890
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Entry
TUM17387_36890 CDS
T07543
Name
(GenBank) hypothetical protein
KO
K03110
fused signal recognition particle receptor
Organism
scaa
Shewanella carassii
Pathway
scaa02024
Quorum sensing
scaa03060
Protein export
scaa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
TUM17387_36890
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
TUM17387_36890
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
TUM17387_36890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
scaa02044
]
TUM17387_36890
Secretion system [BR:
scaa02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
TUM17387_36890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP54_N
HC2
AAA_22
AAA_17
AAA
APS_kinase
ABC_tran
nSTAND3
AAA_14
YqeC
AAA_31
AAA_18
Motif
Other DBs
NCBI-ProteinID:
BCV68330
LinkDB
All DBs
Position
complement(4213814..4215568)
Genome browser
AA seq
584 aa
AA seq
DB search
MAKKGFFSWFRKDKRNDEAEQAAKLAEQQAAEAAAEAERLTAEKAQAEQAEAERIAVEKA
QAEQAEAERIAAEKAQAEQAEAERLAAEKAQAEQAEAERIAVEKAQAEQAEAERIAAEKA
QAEQAEAERIAAEKAQAEQAEAERLAAEKAQAEQAEAERIAVEKAQAEQAEAERIAVEKA
QAEQAEAERLAAEKAQAEQAEAERLAAEKAQAEQAEAERLAAEKAQAEQAEAERLAAEKA
QAEQAEAERLAAEKAQAEQVAEEQAQPEPQAKPAKEGFFARLKRGLMRTSENIGSGFIGL
FRGKKIDDDLFEELEEQLLIADVGVETTSRLISSLTDHASRKQLKDAEALYELLQQEMLA
TLEPVSAPLVPDNAAGPFVILMVGVNGVGKTTTIGKLAKQYQREGKSVMLAAGDTFRAAA
VEQLQVWGQRNDIPVIAQHTGADSASVLFDALQAAKARNVDVLIADTAGRLQNKSHLMEE
LKKVVRVMKKLDPDAPHEVMLTLDACTGQNAISQAQLFQEAVGVTGISISKLDGTAKGGV
IFAIADKFGIPIRYIGVGEQIDDLRTFNAKDFIEALFSQEKADN
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaaaggttttttttcctggtttcgtaaagacaaacgcaacgacgaagccgaa
caggcggccaaactcgccgaacaacaggctgcagaagccgcggccgaggccgaacgttta
actgctgaaaaagcccaggccgaacaagccgaagctgagcgtattgcggttgaaaaggcg
caggccgagcaagccgaagccgagcgtattgctgctgaaaaggcacaagccgagcaagct
gaagccgagcgtctggcggctgaaaaggcccaggccgaacaagccgaagccgagcgtatt
gcggttgaaaaggcccaggcagagcaagccgaagccgaacgtattgctgctgaaaaggca
caagccgagcaagccgaagccgagcgtattgcggctgaaaaggcacaggcagagcaagcc
gaagccgaacgtttggcggctgaaaaggcccaggccgagcaggcagaagccgagcgtatt
gcggttgaaaaagcgcaggccgaacaagccgaagccgagcgtattgcggttgaaaaagcg
caggccgaacaagccgaagccgagcgtctggcggctgaaaaggcccaggccgagcaagcc
gaagccgagcgtctggcggctgaaaaggcccaggccgagcaagccgaagccgagcgtctg
gcagctgaaaaggcccaggcagaacaagcagaagccgagcgtctggcggctgaaaaggcc
caggccgaacaagccgaagctgagcgtctggccgctgaaaaagcacaagctgaacaggtt
gccgaggaacaagctcaacctgagccacaggcaaaacctgctaaagagggcttctttgcc
cgcctcaagcgggggctgatgcgcaccagcgaaaatatcggtagcggttttatcgggctg
tttcgcggtaaaaagattgatgatgacctgtttgaagagctcgaagagcaactgcttatt
gccgacgttggggtagaaaccaccagtcggttgatctccagcctgacagatcatgcttca
cgcaagcagctcaaggatgccgaagccttatatgaattgctgcagcaggagatgctggcg
acgctggagcctgtgagtgcgcctctggtgccggacaatgccgccgggcctttcgttatt
ttaatggtgggtgtcaacggcgttggcaagaccaccaccataggcaagttggccaaacag
tatcagcgcgaaggcaagtctgtcatgctggcagccggtgataccttccgcgcggctgcg
gttgagcagctgcaggtttggggccagcgcaacgatattcctgtgattgcccagcatacc
ggtgccgacagcgcctctgtgctgtttgatgccctgcaggctgccaaggccagaaatgtt
gatgtgttgattgccgataccgccggtcgcttgcagaacaagagccatttgatggaagag
ctgaagaaagtggttcgggtgatgaagaaactggatccggacgctccccatgaagtgatg
ctgaccctggatgcctgtacgggccagaatgccatcagtcaggcgcaactgttccaggaa
gcggtcggggttaccggtatcagtatcagtaagctggatggcaccgccaaaggcggagtt
atctttgccattgccgataaatttggtattcctattcgttacataggcgtgggagagcag
atagacgatctgcgtaccttcaatgccaaagactttatcgaagccctgttcagtcaggag
aaggcggataactga
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