Shewanella carassii: TUM17387_37530
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Entry
TUM17387_37530 CDS
T07543
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaa02000
]
TUM17387_37530
Transporters [BR:
scaa02000
]
Other transporters
Pores ion channels [TC:
1
]
TUM17387_37530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BCV68394
LinkDB
All DBs
Position
complement(4275455..4277539)
Genome browser
AA seq
694 aa
AA seq
DB search
MSHIPVKLSALALALGCAMQANAAPIERDPLVDNAMDVIVVHGERANATEVATTSWSISE
EEIQALGAQSLDEVLKNVPGVYVRYGGEGTPRVDIRGFKTRHVTLLINGVPANSADDGQF
DPSVIPTSQIARVEVSVGPTSVLYGPGGAGGVINIITKRGSSAPALSGNLELAKDDTFKG
DISAAGSGDNWQGLISAGYQHTDGFPMSSDYQVTEYQDKYLRNNADKELTNLYAQGSYWL
SDNTQLIANMALRSGEWGKPPRDGSGSGRVKFERVDDYDSQTFQLGLAHKFNDTFTFRGF
GYHNQSDTYETVYGDDSYAALTDSQDGRSTVQGANLQLITDFDTAGMLTTSVIAEKQSWE
ALAESLGSSKSGSRKASGGGKGSGGGSGGGSGSGGGNGSGGGSGSGGGSSASTELFDDSA
WVYTAAAEYQFQSEGDWGFTLGGAYHDMDKTEGNENDYSALASGFWQAADETRLSLSAAR
KVRFPSMRNLYSLSSGNQELETEISKHVELGLEQGLGMNTELQLYLYHTDADDYIAKDVN
GMYQNIGNYRFQGLDTVLSNNSIENLDLSLSYSYLNAEDRDSSTGFDGLDYRPKHQLRFQ
LGYKLPIETRIHLNVERIMDQNYYDKEKIGGQKVWQEKSLEDYTLVDINLVQPLLKDNLE
LYLRATNLLDENYYQSDSLPQAGRQVFVGINWQI
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatataccggtaaaactctctgccctcgcactggcgttgggctgtgccatgcag
gccaatgcggcccctattgaacgtgatcctttggtggacaacgcaatggatgtgatagtg
gtgcacggtgagcgtgccaacgctaccgaagttgctactaccagttggagcatttccgaa
gaggaaatccaggcactgggagcccagagcctggatgaagtgttgaagaatgtccccggc
gtttacgtgcgttacggcggcgagggcactccaagagtggatatccgcggtttcaagacc
cgccatgtgaccctgttgatcaatggcgtaccggccaatagcgccgatgatggtcagttt
gatcccagcgtgatcccaactagtcagattgccagggttgaagtctccgttggcccaact
tcagtactctatggcccaggcggcgccggtggtgttatcaacatcatcaccaaacgagga
agcagcgctcctgcgttatccggcaacctggaactggcaaaggatgacaccttcaagggt
gatatcagtgccgccggttcgggcgacaactggcaggggcttatcagtgctggttatcag
cacacagatggttttcctatgtcatctgactatcaagtcactgagtatcaagataaatat
ctacgaaacaatgcagataaagaactgaccaacctgtacgctcaaggcagctactggctc
agtgacaacactcaactgattgccaatatggcactgcgctcaggcgagtggggcaagcca
ccaagagatggcagcggtagcggtcgggtcaagtttgaacgggtcgatgactatgattca
cagactttccaactgggtctggcacacaagttcaatgatactttcactttccgtggcttt
ggttatcacaaccagagcgacacctatgaaaccgtttacggcgatgacagctacgccgca
ttgaccgactcccaggacggccgctctacagtgcaaggcgccaatctacagctgatcacc
gacttcgacaccgcaggcatgctgacgacttcagtgattgctgaaaagcagagctgggaa
gcgctagccgaaagcctgggctcctccaagtcaggcagccgcaaggcctctggtggcggt
aagggatccggtggtggttctggcggtggttcgggctccggcggtggtaatggttctggt
ggtggcagcggctctggtggtggtagcagtgctagcactgaattattcgatgattcggcc
tgggtttatactgcggcggccgagtatcagttccaatcagaaggcgattggggctttact
ctgggtggtgcttaccacgatatggacaagaccgaaggcaacgagaacgattactcggcg
ctggcctcaggtttctggcaagcggccgatgagactcgtctgagcctgagtgcggctcgt
aaggtacgtttcccctcgatgcgtaacctttattccctatcttccggtaaccaggagctg
gaaacggaaatctccaagcatgttgagctggggctggagcaggggctgggaatgaatacc
gagctgcagttatacctctatcacactgatgccgatgattacattgccaaagatgtcaat
ggcatgtaccagaacataggcaactatcgcttccagggtttggataccgtgctgtccaac
aacagcatagagaatctggatctgagcttgagctacagctatctgaacgccgaagacaga
gacagcagcacagggtttgatggtctggactatcgtcccaagcatcaactgcgcttccag
ttgggttacaagttgccgatcgagactcgcatccacctgaacgtagaacgcatcatggac
cagaactactacgataaggagaagatcggcggtcaaaaggtgtggcaggagaaatccctg
gaggattacaccctggtggacatcaatctggtacagcctttgcttaaagacaacttggaa
ctctacttgcgagccactaacctgctggacgagaattactatcagagcgattctctgcct
caggccggtagacaagtctttgttgggattaactggcagatctga
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