Shewanella carassii: TUM17387_37880
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Entry
TUM17387_37880 CDS
T07543
Symbol
rlmF
Name
(GenBank) ribosomal RNA large subunit methyltransferase F
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scaa03009
]
TUM17387_37880 (rlmF)
Enzymes [BR:
scaa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
TUM17387_37880 (rlmF)
Ribosome biogenesis [BR:
scaa03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TUM17387_37880 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
Methyltransf_12
MTS
Methyltransf_23
Motif
Other DBs
NCBI-ProteinID:
BCV68429
LinkDB
All DBs
Position
complement(4318565..4319644)
Genome browser
AA seq
359 aa
AA seq
DB search
MTEVKKHRFNASTSKARAEVKVRTRVKKKAPKATAGKTSVKTGGKAKDKGLHPRNPHRQG
YDFATLVASYPALAPHLITTDYGQVSIPFAEPQAVLALNAALLQHHYQIQGWQLPEGYLC
PPIPGRVDYLHHIADLLAEGGKIPQGRRIRGLDIGTGANGIYPLLGSSVYGWQFVGADIN
PVALDNVAGVLQHNLKLASAIELRLQPKPEQIFHGLLQAGECFDFSLCNPPFHASAADAR
SGSERKQRNLATNRGEQHQRQEHKLNFGGCQAELWCDGGELGFLLRMIHESRDYGGQVLW
FSSLVSKGDNLKPCQQALKQLGAKEVKILEMQQGNKQTRVLAWSFFDAAARRQWWKFKA
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgactgaggtaaaaaagcataggttcaacgcttcgacaagcaaggccagggccgaagta
aaggttaggacaagagtaaagaaaaaggctccaaaggcgacggccggcaaaacctcggtt
aaaacgggcgggaaagccaaggacaagggcctccatccgcgcaacccgcaccgccaaggc
tatgactttgcgactctggtcgccagttatcctgcgctcgcgcctcaccttatcaccaca
gactatggccaggtttcgatcccctttgccgaaccgcaagctgtcttggcacttaatgcc
gccttattgcagcaccattatcaaatccagggttggcagttgcccgagggctatctgtgt
ccgccaattcctgggcgagtagactatttgcatcatatcgccgatctgctggctgaaggc
ggtaagatcccccaaggtcggcgcattcgcggcctggatataggcacgggagccaacggc
atctaccccttgcttggctcaagtgtctacggctggcagtttgtcggcgccgatatcaac
cctgtggcgctggataatgtcgccggcgttttacagcacaatctcaagctggccagcgcc
attgaactgcggctgcagcccaagccagagcagatatttcatggtttgctgcaggcgggg
gagtgttttgacttcagcctctgtaatccgccgtttcatgcctcggccgccgatgcccgc
agtggcagcgaacgcaagcagcgcaatctggcgaccaatcgtggtgagcaacatcagcgt
caggagcataagttgaactttggcggctgtcaggccgagctttggtgcgatggtggcgag
ttgggcttcctgctgcggatgattcacgaaagtcgcgactatggcggacaagtgctgtgg
ttttcttctttggtgtccaagggtgacaacctcaaaccctgtcagcaggcgttaaagcaa
cttggcgccaaagaggtcaagattctggagatgcaacagggcaataagcagactcgggta
ttggcctggagtttcttcgatgccgccgccaggcgtcagtggtggaagttcaaggcttga
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integrated database retrieval system
