Shewanella carassii: TUM17387_38010
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Entry
TUM17387_38010 CDS
T07543
Symbol
ybdG
Name
(GenBank) small conductance mechanosensitive ion channel protein YbdG
KO
K16053
miniconductance mechanosensitive channel
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaa02000
]
TUM17387_38010 (ybdG)
Transporters [BR:
scaa02000
]
Other transporters
Pores ion channels [TC:
1
]
TUM17387_38010 (ybdG)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
BCV68442
LinkDB
All DBs
Position
complement(4332111..4333400)
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AA seq
429 aa
AA seq
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MDNLDKDLRFELSHWLSQLGIDIIPEDGLSTSIMVIACLLLAGLAYFIVRRGVVRAMNLV
IQRSKVTWDDIFMRHRVLEKLAMLVPALVLNLLIPITLTDHKLLAGLVDKLLSVWLVVLL
IRAAYAALDAVDEVADVKLISRRLPVKSFVQLIKLFLFFVAIIISISILADQSPVYFLSG
LGVATGLVMLVFKDTILGFVAGIQLAANRMVSTGDWIQMDKYGADGAVEEVSLTTVKVRN
WDKTITMIPAYALVSDAFRNWRGMSESGGRRIKRSVNIDINSIHFLTEEDRQRLAKINYL
KEYLPQKIHEITESNAKVSDIDMPVNGRRLTNVGTFRAYLLEYLKHHDKVHKDMTLMVRQ
LAPTTEGLPIELYIFTNDTRWAYYEDIQSDIFDHIFAILPQFGLRAFQGPTGNDIRSLKD
NGASANKPT
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
ttggataacttggacaaagacttgagatttgagctgtctcattggctatcacaattggga
atcgacattatcccggaagatggtttgtccacttcgatcatggtgattgcctgcctgttg
ttggcgggactggcttattttattgtccgtcgcggcgtagtacgggcgatgaacctggtg
attcaacgttccaaagtgacttgggacgacatctttatgcgccacagggtgctggaaaag
ctggcgatgctggtgccggcgctggtgctcaacctgctgatccctattacgctgaccgac
cataaactattggcgggcttggtcgacaaactgctcagtgtctggctggtcgtcttgctg
atccgcgccgcctatgcggcattggatgcggtcgatgaagtggccgacgttaagttgatt
agccgccgtttaccggtgaagagctttgtacagctgatcaagctgttcctattcttcgtt
gccatcattatttccatctcgattttggccgaccaatcaccagtttatttcctcagcggc
ttgggtgtcgccacaggtttggtgatgttggtgttcaaggacaccatactgggttttgtc
gccggtattcagctggcagcgaaccgcatggtcagcaccggtgattggattcagatggat
aaatacggcgccgatggcgcggtggaagaggtgtcgctgactacggtcaaggttcgcaac
tgggacaagactatcaccatgatcccggcctatgcgctggtgtcagatgccttccgtaac
tggcgaggcatgtccgagtcaggcggtcgccgaatcaaacgttcggtcaacatagatatc
aacagcatacatttcctgaccgaagaagacaggcagcgtttggcgaagattaattacctc
aaagaatatctgccgcagaagatccatgagattaccgagtccaatgctaaggtgtcggat
attgatatgccggtcaatggccgcaggttgactaatgtggggaccttcagagcctatctg
ctggagtatctcaagcaccatgacaaggtgcacaaggatatgaccctgatggtgcggcaa
ttggcgcccaccaccgaagggctgccgatcgagctgtatatcttcaccaatgatacccgc
tgggcatactatgaagatattcagtccgatatcttcgaccacatctttgctatcttgccg
caattcggactgcgggccttccaggggccgaccggcaacgatatccgcagcttgaaagat
aatggagccagcgcaaataagcctacatag
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