Shewanella carassii: TUM17387_38110
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Entry
TUM17387_38110 CDS
T07543
Name
(GenBank) membrane-bound lytic murein transglycosylase C
KO
K08306
peptidoglycan lytic transglycosylase C [EC:
4.2.2.29
]
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scaa01011
]
TUM17387_38110
Enzymes [BR:
scaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
TUM17387_38110
Peptidoglycan biosynthesis and degradation proteins [BR:
scaa01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
TUM17387_38110
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Mltc_N
SLT
SLT_4
SLT_2
FAM220
Motif
Other DBs
NCBI-ProteinID:
BCV68452
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All DBs
Position
complement(4342464..4343597)
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AA seq
377 aa
AA seq
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MIDVLKNLWLLLLPLILSACAQQPVTCVCDNPQSNRPPVPVVAISPSQERQAFEKIVKYF
ASQVKKQWGDDNYMVASKHQYVKYIDGYRTRAHIDFDKGKIWVSTVSRHQPKARLKNAIV
ETLLMPADPTKIDLFSDKRVMISGKPFLLGQVVDHDGKSIEWQWRANRFAEYLLANKLVT
KKLKKGQAYYVEIDMVRDHLSQREYQYAHLIREASRRYQINEDLLYAIIKTESSFNPYAV
SHAGAYGLMQVIPKTAGADVFKLIKNRNDIPTRDYLFDPANNIDTGAAYFHILKNRYLKD
VSNPSSRHYSMISAYNGGTGGVLATFDPDRQRAMRELNALTPSQVYKELTTAHPKAEARR
YLQKVLYFQKEFNSGNL
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgattgacgttttgaaaaacctatggcttttgttgttgccgctaattctgtctgcctgt
gcccagcaaccggtaacctgtgtgtgtgacaatcctcaatccaatcgccctccggttccc
gtggtcgccatttcgccttctcaagagcggcaggcgtttgaaaaaatcgtcaaatacttc
gcctctcaagtcaaaaaacagtggggcgatgataactatatggtggccagtaaacatcaa
tatgtgaagtacatagatggctaccgtacccgagcccatattgactttgacaagggcaag
atttgggtcagcaccgtttctcgccatcagcccaaggccagattaaaaaatgccatagtg
gaaacgttgctgatgccagccgatccaaccaagatagatctattcagtgacaagagagtc
atgatctcaggcaagccatttttgcttgggcaagtggttgatcatgatggtaaatcaata
gaatggcagtggcgtgctaaccgttttgccgagtatctgttggccaacaagctggtgacg
aaaaagctgaaaaaggggcaagcctattatgttgaaattgacatggtgcgtgaccacctc
agtcaacgtgaatatcagtacgctcatttgatccgcgaggcttcccgccgctatcaaatc
aatgaagatctcctgtatgccatcatcaaaaccgagtccagctttaacccctatgccgtc
agccacgccggggcctatgggttaatgcaagtgatccccaaaacggccggggccgatgta
ttcaagctcatcaagaatcgcaatgatattccaaccagagactacctatttgatccggct
aataatattgataccggtgcggcctattttcatattttgaagaatcgctatctcaaggat
gtcagcaatccttcttcgcggcattattcgatgatttctgcctacaacggtggaaccggc
ggtgtgttggcgacatttgatcccgaccggcagcgggcgatgcgggaactcaatgcgttg
acaccctcgcaagtatacaaggagttgactacggcgcatcccaaggccgaagccagaaga
tacttgcagaaagtactgtattttcaaaaagaatttaatagcggtaatttatag
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