Shewanella carassii: TUM17387_38930
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Entry
TUM17387_38930 CDS
T07543
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
scaa
Shewanella carassii
Brite
KEGG Orthology (KO) [BR:
scaa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scaa02000
]
TUM17387_38930
Transporters [BR:
scaa02000
]
Other transporters
Pores ion channels [TC:
1
]
TUM17387_38930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
BCV68534
LinkDB
All DBs
Position
complement(4431116..4433206)
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AA seq
696 aa
AA seq
DB search
MRFKFSCVGMAVVAAISSMPLAAAQAPEDIERISVTGRSFNDYKTGVASGAMRGDINLMD
TPQSVTVIPDFVTDEQLATNLAEVLVNDSSVTSGSEKWNRQVFNIRGFELDSGSGYLING
QQQWSHYVQPIETLQQVEVLKGPSSMLYGQSGPGGLINMVTKKPTYDTLFNLGFDTDDNG
STRFQLDAGGSLNEAQTIRYRTVLVKQDTQYWREYQNGENQERDRWLGYLNLEFDITDDL
LLSLKYDRTQDKTGIDRGGWLNSKGELIGGRDIIWDMPWAFTDNTIENLGAELTYFISDN
WKVKAGYNDQQFNRQRLDSLPSLIKGSEDPFTDGYTVSPFDRYDDWQHKTGFIDITGNFS
TGVLEHQFLIGANMLDYYYGQLREKGESVSVMPGQPIANPGLDYHNDTSLYESDYKHYGF
YIQDLVTINEQWKLLAGVRYDEQKKDGAGNNSYAVSPKFGVIYSPMDNGSIYVNYSKSFS
PQGSVNDPNDVNDKMNLDPEYGEQYEIGTKWELFDGGLLLTGAVFDITVSNVTVTQDLGA
GESITTQSGEQRHKGFEMGAQGRLSDKWFMTGSMMYLDAEYDRPAEDSLNGKTPIDAPEW
SANIWTRYEMTEALALNFGAVYVGERFADKENMITKDGYVRFDLGAAYTMDVMGTDVSVR
VNMKNLFDKEYLAGGTNTDVTVGEGRHVSLALEAKF
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgaggtttaagttttcctgtgtaggtatggcagtggttgctgctatctcttcaatgccg
ttggcggcagcgcaagcgccagaagatattgaacgtatcagtgttaccggtcgtagcttc
aatgattataagaccggcgtcgcttctggtgcgatgcgtggtgatatcaatctgatggat
acacctcaatccgttaccgttatccccgattttgttaccgatgaacagctggcaaccaac
ctggctgaagtcttggtgaatgactcaagcgtgaccagtggcagtgaaaaatggaatcgc
caggtatttaatattcgtggttttgagttggactcagggtctgggtacttgatcaatggc
cagcagcagtggtcacactatgtacaacctattgaaactctgcagcaagtagaagtgctt
aaggggccgtcaagtatgctctacggccagtccggccctggtggcttgatcaacatggtg
accaagaagccgacctacgacacactgtttaacttagggtttgatacagatgacaacggc
tctacccgctttcaactggatgccggtggtagtctaaacgaagctcagactatccgttat
cgcactgtgctggttaaacaggatacccagtattggcgtgagtatcagaatggtgaaaat
caggaaagagatcgctggttgggctacctgaatctggagtttgatattaccgatgatctt
ttgctgtcacttaaatatgaccgtacccaagataaaaccggaatagatcgtggcggttgg
ttgaacagcaagggtgagcttattggtggtcgggatattatctgggatatgccatgggcg
tttactgacaataccatcgaaaatttaggggccgaactcacttactttatcagcgacaac
tggaaagtgaaggccggctacaatgatcagcagttcaaccgccaacggttggactctctt
ccaagcttgatcaaaggttctgaggatccatttactgatggctacactgtgagtccattc
gatcgttatgatgattggcaacataaaacaggattcattgatattaccggtaacttcagt
accggcgttttggaacatcagttcctgatcggtgccaatatgttggactactactatggg
cagttgcgcgaaaaaggcgaaagtgtttctgttatgcctggccagcccatcgcaaatcca
ggtttggactatcataacgatacttcactctatgaaagcgactataagcactatggtttc
tatattcaggacctggttactatcaatgaacagtggaaactgttggccggtgttcgttat
gacgaacaaaagaaagatggtgccgggaacaacagttatgccgtttcacctaaatttggg
gtgatctattcgccgatggataacggcagtatctatgtcaattactcaaagagcttcagt
ccccaagggagcgttaatgatcctaatgatgttaatgacaagatgaatctggatcctgag
tatggggaacagtatgaaataggcaccaagtgggaactgttcgatggtgggttattactg
acaggcgccgtgtttgatataactgtctccaatgttaccgtgactcaagacctgggtgct
ggtgaatcaataaccactcagagtggtgaacaacgtcataaagggtttgagatgggcgct
cagggacgactcagtgataagtggtttatgacaggttccatgatgtatctggatgcagag
tatgatcgccctgcagaagatagtctcaatggtaaaacgccgatagatgcgcctgaatgg
tcggccaatatctggacccgttatgagatgacagaagcgttggctctgaattttggtgcc
gtctatgttggtgaacgctttgccgataaagagaacatgatcaccaaagatggttatgta
cgttttgacctaggcgccgcctataccatggatgtgatgggaacagatgtcagcgtaagg
gttaacatgaagaatctgtttgataaagaatatcttgccggcggtaccaatacagatgtg
actgtgggtgaaggtcgtcatgtgagcctggcgctggaagccaagttttaa
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