Sphingomonas cannabina: LZK98_00035
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Entry
LZK98_00035 CDS
T08607
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00550
Peptidoglycan biosynthesis
scab01100
Metabolic pathways
scab01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LZK98_00035
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LZK98_00035
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
scab01003
]
LZK98_00035
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scab01011
]
LZK98_00035
Enzymes [BR:
scab01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
LZK98_00035
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LZK98_00035
Glycosyltransferases [BR:
scab01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
LZK98_00035
Peptidoglycan biosynthesis and degradation proteins [BR:
scab01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
LZK98_00035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
UIJ45395
LinkDB
All DBs
Position
complement(3798..6326)
Genome browser
AA seq
842 aa
AA seq
DB search
MSESTADQPDLRLRLQRDANGVWAAVRRIWTRRWVRWLSYAAGVLAVLFGIFWISLASGL
PSVDKLKAYEPPLPTNVRGGDGTPIHSYARERRVQLSYDEYPPLLVRAFLAAEDRTFFEH
HGVDYPGIVSAMITNLTNDKRPIGASTITQQVAKNLLIGNERSYVRKAKEAMLAFRIEDT
LTKQQILELYLNSISLGRNAFGVEAASHAYFDKELNELSLAQLAYLAILPKGPSNYSPDR
YPDRALARRNWVLGEMLRNRFITQAQHDQAVAEPLGTVSRRSPRYDPNGGYFVEEVRRQL
LERFGETDKDGPHSVYAGGLWVRTSYDPRLQQYAQDALREGLLRFDRGRGWSGPLGHAVI
EGDSWFGPFVASNIGINYADWRTAIVIGTGGDAATIGFGDGKTGTLPRWGAQMPVRGQGG
TAFAALKPGDIIAVAPENGQWALRSVPKISGAFVVEEPSTGRVLAMQGGFDSRLSSFNRA
TQAMRQPGSTIKPIVYSAALANGMTPASIIVDGPFCVYQGARLGQKCFRNFGGGGSGPHT
MRWGIEQSRNLMTVRAAATVGMSHVVDMIQQLGVSEQKLPAYLSYALGAGETTVTRMVNA
YSILVNQGRALTPTLVDYVQDRHGKVIWPANWRACERCNAPDWDGKPMPRPTIRWRQAVD
ALTAFQMVHITEGVIQRGTATILRDLNRPMMGKTGTTTGPTDVWFVGGTPQMIGGLYMGY
DSPSNLGGYAQGGTIAAPIFKAFAQKAYEGLPVVPFRAPPGIRMMRIDRNSGRPVYGAWP
VSNDGKPAVIWEAFKPETEPRRARRTQEDQAPKAAATATQAAPQAQQRPSDSDFLQREGG
IY
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagagtaccgccgaccagcccgacctccgcctgcgcctgcagcgtgatgccaac
ggagtctgggcagccgtccgacgcatctggacgcgccgctgggtgcgctggctgagctac
gccgcgggcgtgctcgccgtgctgttcggtatcttctggatctcgctcgcgagcggcctg
ccctcggtcgacaagctcaaggcctatgagccgccgctgccgaccaacgtgcgcggcggc
gacggcacgccgatccacagctacgcccgcgagcggcgcgtgcagctcagctacgacgaa
tatccgccgctgctggtccgcgccttcctggcagcggaggaccggaccttcttcgagcat
cacggcgtcgactatccgggcatcgtctcggcgatgatcaccaacctcaccaacgacaag
cggccgatcggcgcctccaccatcacccagcaggtcgccaagaacctgctgatcggcaac
gagcgcagctatgtccgcaaggccaaagaggcgatgctcgctttccggatcgaggacacg
ctgaccaagcagcagatcctggagctttacctcaactcgatctcgctcggccgcaacgcg
ttcggcgtcgaggcggcgagccatgcctatttcgacaaggagctgaacgagctcagcctg
gcgcagctggcctatctcgccatcctgcccaaggggccgtccaactacagtcctgaccgc
taccccgaccgcgcgctggcgcggcgcaactgggtgctgggcgagatgctgcgcaatcgc
ttcatcacccaggcgcagcacgaccaggcggtcgccgagccgctcggcaccgtcagccgg
cgcagcccgcgctacgaccccaacggcggttatttcgtcgaggaagtgcgccgccagctg
ctcgagcgtttcggcgagaccgacaaggacggaccgcacagcgtctatgccggcggcctg
tgggtgcgcacctcctacgatcctaggctccagcaatatgcgcaggacgcgctgcgcgag
ggactgctgcgcttcgaccgcgggcgcggctggtcggggccgctcggccatgcggtgatc
gagggggacagctggttcggccccttcgtcgcgagcaacatcggcatcaactatgccgac
tggcgcaccgcgatcgtgatcggcaccggcggcgacgccgcgacgatcggcttcggcgac
ggcaagaccggcacgctgccgcgctggggcgcgcagatgccggtccgcggccagggcggc
accgccttcgccgcgctcaaacccggcgacattatcgcggtcgcgccggagaacgggcaa
tgggcgctgcggagcgtgcccaagatctccggcgcgttcgtggtcgaggagccctcgacc
ggccgcgtgctggcgatgcagggcggcttcgattcgcgcctcagctcgttcaaccgcgcg
acgcaggcgatgcgtcagcccggatcgacgatcaagccgatcgtctattcggccgcgctc
gccaatggcatgaccccggcgtcgatcatcgtcgacggcccgttctgcgtctatcagggt
gcgcggctcggccagaaatgcttccgcaacttcggcggcggcggctcggggccgcacacg
atgcgctggggcatcgagcaatcgcgcaatctgatgacggtgcgcgccgccgcgacggtc
ggcatgagccatgtcgtcgacatgatccagcagctcggcgtgagcgagcagaagctgccg
gcctatctttcctacgcactgggcgcgggtgagacgacagtgacgcgcatggtcaacgcc
tattcgatcctggtgaaccagggccgcgcgctgaccccgaccctggtcgactatgtccag
gatcgtcacggcaaggtgatctggccggccaactggcgcgcgtgcgagcgctgcaacgcg
cccgactgggacggcaagccgatgccgcggccgacgatccgctggcggcaggcggtcgac
gcgctcaccgccttccagatggtccacatcaccgagggcgtgatccagcggggcacggcg
acgatcctgcgtgacctgaaccggccgatgatgggcaagaccggcaccaccaccggcccg
accgacgtgtggttcgtcggcggcacgccgcagatgatcggcgggctctatatgggctat
gattcgccgtcgaacctcggcggctatgcccagggcggcaccatcgccgcgccgatcttc
aaggcgttcgcgcagaaagcctatgaagggctgccggtcgttcccttccgtgccccgccg
ggcatccgcatgatgcggatcgaccgcaacagcgggcggccggtctatggcgcctggcca
gtctccaacgacggcaaaccggcggtgatctgggaagccttcaagcccgagaccgagccg
cgccgcgcccgccgcacgcaggaggaccaggcccccaaggccgccgcgaccgccacccag
gccgcgccccaggcccagcaacggccgagcgacagcgatttcttgcaaagggaaggcgga
atctactag
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