Sphingomonas cannabina: LZK98_00215
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Entry
LZK98_00215 CDS
T08607
Symbol
fliD
Name
(GenBank) flagellar filament capping protein FliD
KO
K02407
flagellar hook-associated protein 2
Organism
scab
Sphingomonas cannabina
Pathway
scab02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LZK98_00215 (fliD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
scab02035
]
LZK98_00215 (fliD)
Bacterial motility proteins [BR:
scab02035
]
Flagellar system
Flagellar assembly proteins
Filament
LZK98_00215 (fliD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FliD_C
FliD_N
Pox_A8
Motif
Other DBs
NCBI-ProteinID:
UIJ45425
LinkDB
All DBs
Position
complement(42530..43912)
Genome browser
AA seq
460 aa
AA seq
DB search
MVDSITKTLGVGSGIDIQALVTSLVDAQFDTRTKLLDKREETLTAQVSAVSQLKNGITGF
NTALKSLVTGGTLQTQPTSANSAIVKVSALAGAKLSGLNATVEVRALASAQVASTATAVP
AGTRIGTGTLQFAFADGTSVAPITIGDGDATLSGIAAKINAAGIGITASVVSDSTGDRLV
MKGATGEAKAFTLSATETAGDAGLAALNVGGGATGTQIVSAAADALVAVDGVEVRRASNV
ITDLLPGVRLELQTAAVGTKVAIGSAPSTAALSQAVNDVVSTYNELYAMLKEATDPVNGS
LARDSGARDMLARLRQLTTINLTGTDDSIPNSLAAIGVVTNRDGTLSLDSAKLATQLAKA
PDAIEAMFADRGDGTGLSSALNAITVAVTSRTTGLGASETRYSQAQTALGEDRDKLSADE
DKTRTRLTQQFGSMDAKVAAYKSTQSFLEQQIAAWNSSND
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggtcgattcgattaccaagacgctcggggtcgggtcgggcatcgacatccaggcgctg
gtgacctcgctggtcgacgcgcagttcgacacgcgcaccaagctgctcgacaagcgcgag
gagacgctgaccgcgcaggtctcggcggtgtcgcagctcaagaacggcatcaccggcttc
aacaccgcgctcaagtcgctggtcaccggcggcacgctccagacgcagccgaccagcgcc
aacagcgcgatcgtcaaggtgagcgcgctcgccggcgccaagctctccggcctcaacgcc
accgtcgaggtgcgcgcgctcgcctccgcgcaggtcgcgagcaccgcgacggcggtgccc
gccggcacgcgcatcggcaccggaacgctgcagttcgccttcgccgacggcaccagcgtc
gcgccgatcacgatcggcgacggcgacgcgacgctgtccggcatcgccgcgaagatcaac
gccgccggtatcggcattaccgcgtcggtggtgagcgattcgaccggcgaccggctggtg
atgaagggcgcgaccggcgaggccaaggcgttcaccctgagcgcgaccgagaccgccggc
gatgccgggctcgccgcgctcaacgtcggcggcggcgcgaccggcacccagatcgtctcc
gcggcagccgacgcgctggtcgcggtcgacggcgtcgaggtccgccgcgcgtccaacgtc
atcaccgacctcctccccggcgtccggctcgaactccagacggcagcggtcggcaccaag
gtcgcgatcggcagcgcaccctccaccgcggcgctgtcgcaggcggtgaacgacgtcgtc
agcacctacaacgagctctacgcgatgctgaaggaggcgaccgacccggtgaacggcagc
ctcgcccgcgattccggcgcgcgcgacatgctcgcgcggctgcgccagctcaccacgatc
aacctgaccgggaccgacgacagcattcccaacagcctcgccgcgatcggcgtcgtcacc
aatcgcgacggcacgctcagcctcgattcggccaagctcgccacgcagctcgccaaggca
cccgacgcgatcgaggcgatgttcgccgaccgcggcgacggcaccggcctgtcgtcggcg
ctcaacgccatcaccgtcgccgtcaccagccgcaccaccggtctcggcgccagcgaaacg
cgctacagccaggcccagaccgcgctgggcgaggaccgcgacaagctgtcggccgacgag
gacaagacgcgtacgcgcctcacccagcaattcggcagcatggatgccaaggtcgccgcc
tacaagagcacgcagagcttcctggagcagcagatcgcggcctggaacagcagcaacgac
tga
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