KEGG   Sphingomonas cannabina: LZK98_00295
Entry
LZK98_00295       CDS       T08607                                 
Name
(GenBank) sigma 54-interacting transcriptional regulator
  KO
K10943  two-component system, response regulator FlrC
Organism
scab  Sphingomonas cannabina
Pathway
scab02020  Two-component system
scab02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:scab00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LZK98_00295
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    LZK98_00295
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:scab02022]
    LZK98_00295
   02035 Bacterial motility proteins [BR:scab02035]
    LZK98_00295
Two-component system [BR:scab02022]
 Other families
  FlrB-FlrC (polar flagellar synthesis)
   LZK98_00295
Bacterial motility proteins [BR:scab02035]
 Flagellar system
  Flagellar assembly proteins
   Others
    LZK98_00295
SSDB
Motif
Pfam: Sigma54_activat Sigma54_activ_2 HTH_8 HTH_30 HTH_28 AAA_5 Sigma70_r4_2 HTH_23 AAA_16 NPIP AAA Xre-like-HTH T2SSE HTH_29 HTH_24 AAA_3 HTH_20 HTH_Tnp_ISL3 HTH_Tnp_1 MerR AAA_7
Other DBs
NCBI-ProteinID: UIJ45440
LinkDB
Position
complement(56349..57617)
AA seq 422 aa
MVSLFPSAAVIRQKYALVSGLRAQGFDIGSFETGRPTPGDLFLIADGETPPVPGRTLIVG
DDGLKAIPFRDGNPARLSYGQDDSGLGAGFAAAMLRPGAPIAADPESLALYALAERIAQS
DITVLVGGPTGTGKEVLARAIHLGSARAEGPFIAINCAALPETMLEAMLFGHVKGSFTGA
SSGGQGFFRAAHGGTLLLDEIAEMPLALQAKLLRALQEREVVPIGATEAEKVDVRVIACA
NRDLQTEVAAGRFRADLYYRLSVFPLATRALAERRGDIPALAAAMIVRHAGDRATLPWLS
DEALDALLRHDWPGNVRELENVIQRALLLARGDRIEAGDIIFDRPAAPAPISFADDEPAT
LGKVVQMSEFAAIRETLAACGGSRTETARRLGISERTLRYRLAKAREQGEDIAQAHSQAI
SA
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggtttcactttttccatccgcggcggtgatccgccagaaatatgcgctcgtctcgggc
ctgcgtgcccaggggttcgacatcggctcgttcgagaccggccggccgacgccgggcgac
ctgttcctgatcgccgacggcgagacgccgcccgttcccggccgcacgctgatcgtcggc
gacgacgggctcaaggcgatcccgttccgcgacggcaatcccgcgcggctgagctacggc
caggacgacagcggcctcggcgccggcttcgccgcggcgatgctgcggcccggtgccccg
atcgccgccgatcccgagagcctggcgctctacgcgctcgccgagcgcatcgcccaatcc
gacatcaccgtgctggtcggcggcccgaccggcaccggcaaggaagtcctcgcccgcgcg
atccacctgggcagcgcacgcgccgaggggccgttcatcgcgatcaactgtgccgcgctg
cccgagacgatgctcgaggcgatgctgttcggccatgtgaagggatcgttcaccggcgct
agctcgggcggccagggcttcttccgggccgcacatggcggcaccctgctgctcgacgag
atcgccgaaatgccgctcgcgctccaggccaagctgctacgcgcgctgcaggagcgcgag
gtggtgccgatcggcgcgaccgaggcggagaaggtcgatgtccgcgtgatcgcctgcgcc
aaccgcgacctccagaccgaggtcgccgccgggcgcttccgtgccgacctctactatcgc
ctctcggtgttcccgctcgccacccgcgcgctcgccgagcgccgcggcgacatccccgcg
ctcgccgcggcgatgatcgtccgtcatgccggcgaccgtgcgacgctgccgtggctgagc
gacgaggcgctggacgcgctgctccgccacgactggccgggcaacgtccgtgagctcgag
aacgtcatccagcgcgcgctgctgctggcacgcggcgaccggatcgaggccggcgacatc
atcttcgaccgtccggccgcgccggcgccgatcagcttcgccgacgacgaacccgccacg
ctcggcaaggtcgtgcagatgagcgagttcgccgcgatccgcgagacgctggcggcgtgc
ggcggcagccgtactgaaacggcgcggcggctcggcatctccgagcgcacgctgcgctac
cgcctcgccaaggctcgcgagcagggtgaggatatcgcccaggcccatagccaggcgatt
tcggcatga

DBGET integrated database retrieval system