Sphingomonas cannabina: LZK98_00705
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Entry
LZK98_00705 CDS
T08607
Name
(GenBank) hypothetical protein
Organism
scab
Sphingomonas cannabina
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YadA_head
YadA_stalk
DUF7310
Baculo_PEP_C
KOW2_Spt5
Motif
Other DBs
NCBI-ProteinID:
UIJ45518
LinkDB
All DBs
Position
complement(133771..141894)
Genome browser
AA seq
2707 aa
AA seq
DB search
MSGFESQNVRRARFAANWVVGAEGASWSQRRRLMAVLRRAHRVLGVDRKDMGVGSLGFGG
GVRSALLGSAGSSGMIGGLAAVAIGIAVMPQIASAQNYQAGGGTASGNNSVAIGASSAAT
TTTGGNAVAIGGGAKAAVTGSGSPVAIGANANASGAAGTALPGGFTSFEAVAVGNSATAT
GQGGTAIGVSAGATGLWSTALGVSATASNQRAIALGAQAAASGTDSIAQGSSASAGAQNA
VAIGFAARATTINSVYLGSRTVPTSGALAQSAIAIGTDVTASQNDATAIGRQSVASGQNS
TATGLRAAASGTNSIAIGSDTIASSTNGTAIGANTSATGDQAAALGRDSHATGLASLAGG
NQAQAQGDYTVAFGSGARAVGQAAVAVGQGAGSGSTTNANSVALGVAAGGFVSGAQNTAI
GGGVANAIRGAGSGVTGTRNIALGTGDGTVAYDATGDASAGNLVTGDDNIAIGTNAGIGV
ATNSTTSIGLNANATADNAVALGTATVADAAESVAIGNGSRATGGKAVAVGSGNVASGDG
AVAIGDPNTAFGDGAIASGKDNTANGNGSVAMGNTNMVGGGGQAVSTPGIAAQGAVGIGY
QNTVVGQGAVALGNTSSAQGNGALAFGDTAAASADAAIALGNQSKASNGSAIAVGRNSSA
SGLDAIALGVEAGAAGVNALALGPGAKAVADETVALGLFATANGTGGLALGSGATATSAD
DVALGSGSVTVAATPTASTTIRGTTYTFAGTTPTSVVSVGAPGAERQIQNVAAGRIDGSS
TDAINGSQLFAVQQSLESAVTGAAAHYYSVNDGGSVTGNYNNDGATGTNALAAGVQTVAS
GANSAAVGVTSTASEAGALVFGNNSTASGVNSLALGTSTVANNLNAIAVGTQAQAAGVAA
TAIGALAQASGGTSVAVGSQANASGLEGVAIGNLAQATATNATALGNQIVAAGDGSVAIG
ANTGLAVDTASTNGIAVGWGSTVANAASGIALGDTASARAANAVALGTNASAFGNGSIAQ
GQGAVAGVSGSAIQTANAVAVGTGAQALALNTIAQGTDASADGSGAIALGWDATAGGDGT
PSNVAIGRASTARGGASVALGNNANAALDFSTAIGNGASALNVYSVAVGTQAIANGLASV
ALGENAIANNTNDVALGSGSTSDAAVGTAGTVINGATYSFAGATPTSTVSVGRAGAERTV
TNVAAGRISDVSTDAVNGSQLFATNQAVESLADTVEATAVHYVSVNDGGTAGGNYNNDGA
LGVGSIALGVGASTDASGVDSIAFGTGASTAGANSMAFGTSASVNGPNAIAIGNGASASN
LTGGTIGSVAIGNSASSSSDTSTAVGGNANAGAAATAVGSNANASTSSAVAIGGGAGGAQ
ATGVGAIAIGGGGSTGVQAAASATGLQAVAIGQNSVAAFGRSVSMGYAAVAGSSSSVAIG
ASATTGATGQNVAVGSGSTANSAAAAGGAVAVGRANTATGDGAVSVGMNNTATGDGSVAL
GRLSRASAEGSLASGDSTNATGRRAVALGSTSQATFDSAVAIGNGAEAGTGLGAVAIGRL
AEAAGAGAISLGNSATATAEGALAFGENAQSAGENSIAIGGESQVTGERSIAIGVGHQVT
GNNSGAIGDPNTVNGSGSYALGNNNTINSNNTFVVGSNVSVAAGLDGAVALGAGSTVTAS
SPTPSATINGTAYTFAGGSPAAGAVVSVGAAGAERQIQNVAAGRISGGSTDAINGSQLYA
TNQAVDNLGTQVTNLDGRVTTIEGDLTNITTGGGIKYFHANSALPDSQALGTDSVAIGPN
AVANNAGDVAIGLNAVSGATTAVGGATIGGTAYTFAGATPSGAFSIGAAGAERQIQNVAA
GQLNGGSTDAVNGSQLFATNQKVDQNTTDIANLDGRVTTVEGDVTNLDGRVTTIEGDLTN
INNGGGIKYFHANSSDPDSQALGTNSVAIGPNAVANNAGDIALGSGSTTDVAVATGGTTI
NGTAYTFAGTTPTSTVSVGAAGAERTITNVAAGRVDGGSTDAINGSQLFATNQAVDGLGT
EVTNLGNTVTNLGNSFTSLDGRVTTVEGSLTNLGNTITNIAGDTNSVFTDANGDGIRYAR
TNETGLAPTDAFAQGVGSTALGYQAQASAGNAVALGRGAQATVDGSLALGAGSVADRALA
PTVGQIPATTGYIPYNTSDQTLLGAISVGSAGAYRQITNVADGTQAQDAVTIRQLAGALS
SFAVTPIMYFHANSTAADSLAIGQESVAIGPQTVVNGNNGIGMGNGAIVQATAPGGTAIG
QNAQVAQADAIALGTNAQGNGIQSVAIGAGANATHSGSVALGAGATTSVGSESGYTGYGL
TAPQNSAGEVSVGSAGAERKVTNVAAGSAATDAVNVSQLQAVDNKVTNLDNRVTNVDNRV
TEVANNVTNLGDSVANSLGGGSTYDPTTGTVTTQLNVGGNTYNNVNDALQSLNQTASAGW
NIQANGGPSTNIGSNGTLNVTAGSNTVVTLNGNQLQVGVVDNPTFAGMVTANGGLTVGAN
TSVNMGGNVVQNVGAGAVNATSTDAVNGAQLHQVQQVANNSVQYDADHNSVTLNPGGSAA
TIHNVAAGVAPTDAVNVQQLNDGLSKTLQSANAYTDQKVAGIQYDLSQVRREANAGTAGA
LAAAGMPQAFEPGRGMLAFGGGTYRGQSAFALGLSRVMDDGVTVVKAGATYDTQQHVGAN
VGVGFQF
NT seq
8124 nt
NT seq
+upstream
nt +downstream
nt
atgtccggatttgagtcgcagaacgttcgtcgcgcccgctttgccgcgaactgggtcgtc
ggcgccgagggcgcgagctggtcgcagcggcgccggctgatggcggtgctgcgccgggcg
catcgggtgttgggcgtcgatcgcaaggatatgggcgtcggatcgctgggcttcggcggc
ggcgtgcgttccgcgctgctcgggtcggctggctcctcggggatgatcggcggtctggcg
gcagtcgcaatcggcattgctgtgatgccgcagattgcaagtgcccaaaactaccaagcg
ggcggcggaaccgcgtcggggaataactcggtggcgatcggcgcgagcagcgcggcgacc
accacgaccggcggcaatgccgtagccatcggaggcggcgcgaaggcagccgtgaccgga
tccggctctccggtcgccatcggggcgaacgccaatgccagcggcgccgccggcactgcg
cttccaggcggcttcacctcttttgaggcggtggcagtgggcaacagcgcgacggcgacg
ggacagggcggcacggcgatcggtgtttcagccggtgcgacggggctctggtccaccgcc
ctgggcgtgagcgccactgcgtcgaatcagcgggcgatagcgctcggtgcccaggctgcg
gcgtccggaacggattccattgcccagggctccagcgccagcgcaggtgcccaaaatgcc
gtcgcgatcggcttcgcggcccgcgcgaccacgatcaattccgtctatctcggctcccgc
accgtcccgacatcaggcgctctcgcgcagagcgccattgccatcggcacggatgtgacg
gcatctcagaacgatgccaccgcgataggacgccaaagcgtggcgtcgggacagaattcc
accgccaccggcttgagggcggccgcgtcgggaaccaattccatcgcgatcggcagcgac
actatcgcgagcagcaccaacggtaccgcgatcggcgccaacaccagcgcgaccggcgat
caggcagcggcgctgggccgcgattcccatgcgactggcctcgcttcgctggcaggcggc
aatcaggcgcaggcgcagggcgactacacggtcgccttcggatcgggagcaagggctgtc
ggccaggctgccgtcgcggtcggccaaggtgcgggttccggttcgaccaccaatgccaat
tcggtcgcgctcggcgtggcagcgggtggcttcgtgagcggcgcccagaacaccgcgatc
ggcggcggcgtcgccaacgccatacgaggcgcgggctcgggcgtcaccggcacgcgcaac
attgccctcgggaccggcgacggcacggtcgcctatgacgccaccggcgacgcctcggcg
ggcaatctggtgacgggcgacgacaatatcgcgatcggcaccaatgcgggcatcggtgtc
gccaccaacagcacgacgtcgatcggcctcaatgccaatgcgaccgccgacaacgcggtc
gccctcggcaccgcgaccgtcgccgatgcggccgaatcggtcgcgatcggcaacggatcg
agggcgaccggcggcaaggcggtcgcggtcggatcgggcaacgtcgcgagcggcgacggc
gcggtcgcgatcggcgatcccaacaccgctttcggcgacggcgcgatcgcgagcggcaag
gacaataccgcgaacggcaacggctcggtcgcgatgggcaacaccaacatggtcggcggt
ggcggccaggcggtgagcacgcccggcatcgccgcgcagggcgcggtcggcatcggctat
cagaacacggtggtcggccagggcgctgtggcgctgggcaacaccagcagtgcgcagggc
aacggcgcgctggccttcggcgacaccgccgctgcgagcgccgacgccgccatcgcactg
ggcaatcagtcgaaggccagcaatggcagcgccatcgccgtcggccgcaacagttcggcc
agcggcctcgatgccattgccctcggcgtcgaggcaggcgccgcgggcgtgaatgccctc
gcgctcgggccgggcgccaaggcggtcgccgacgaaacggttgctctgggactctttgcg
acggccaacggcaccggcggcctcgcgttgggcagcggggcaaccgcgaccagcgccgat
gacgtggcattgggctcgggctcggtgacggttgcggccacaccgaccgccagcacgacg
atccgcggcacgacctacacgttcgccggtaccacgccgaccagcgtcgtctcggtcggc
gctccgggcgccgagcggcagatccagaacgtcgcagccggacggatcgacggcagctcg
accgacgcgatcaacggatcgcagctctttgccgtgcagcaatcgctggaatcggcggtg
accggcgcggcggcacattattacagcgtcaacgacggcggcagtgtcacgggcaactac
aacaatgacggcgccaccgggaccaacgcgcttgcggccggcgtgcagaccgtagccagc
ggcgccaactcggctgcggtcggcgtgacctcgaccgcctcggaagccggcgctctcgtt
ttcggcaacaactcgaccgcctccggcgtcaactcgctcgcgctgggtaccagcaccgtc
gcgaacaatctcaatgccatcgcggtcggcacgcaggcccaggcagcgggagtagcggcc
acggcgattggcgcgctcgcccaggcgagcggcggcaccagcgtcgcggtcggcagccag
gccaacgcgagcgggctggagggcgtcgcgatcggcaatctggcccaggcgaccgccacc
aacgcgaccgccctcggcaatcagatcgtggcggcaggcgacggcagcgtcgcgatcggg
gcgaacaccgggctggccgtcgacacggcttcgaccaacggcatcgcggtcggctggggc
tcgaccgtcgccaatgcggcctccgggatcgccttgggcgacacggcgagcgccagggcg
gccaacgcagtcgccttgggtacgaacgccagtgctttcggcaatggctcgatcgcccaa
ggtcagggcgcggtggcaggcgtgagcggcagcgcgatccagaccgccaatgccgtcgcc
gtcggcaccggcgcacaggcgctggcgctcaacaccatcgcgcagggcacggatgccagc
gcggacggttccggcgcgatcgcgctgggctgggacgcgacggccggcggagatggaacg
ccgagcaatgtcgcgatcggccgggcctcgacggcccggggcggcgccagcgtcgcgctg
ggcaacaacgccaatgccgcgctcgacttcagcacggcgatcggcaacggcgccagcgcg
ctcaacgtctacagcgtcgcggtgggcacgcaggccatcgccaacggcctggcatccgtc
gcgctcggcgaaaacgcgatcgccaacaacaccaacgacgtcgcgctgggaagtggctcg
acctcggacgcagcagtcggcacggccggtaccgtcatcaacggcgccacctattccttt
gctggcgccacgccgaccagcacggtgagcgtcggcagggcgggcgcggagcggaccgtc
accaacgtggccgccggtcggatcagcgacgtctcgaccgatgcggtcaacggctcacag
ctcttcgccaccaaccaggcggtcgaatcgctggcggacacggtcgaggcgacggccgtc
cattatgtcagcgtcaacgacggcggcacggccggcggcaactacaacaacgacggcgcg
ctcggggtcggttcgatcgcgctgggcgtcggcgcctcgacggacgccagcggcgtcgat
tcgatcgcgttcggaacgggtgcctcgacggccggggccaactcgatggcgttcggcacc
agtgcctcggtaaacggaccaaatgccatcgccatcggcaatggtgccagcgcttcgaac
ttgaccggcggaacgatcggatcggtggcgatcggcaattcggcgagcagttcgtcggac
accagcaccgcggttggcggcaacgccaatgcgggcgccgccgccaccgccgtgggcagc
aatgctaacgcgtcgaccagtagtgcggttgcgatcggcggcggcgcgggcggcgcgcaa
gcgaccggcgtcggcgccatcgcgatcggcggtggtggcagtaccggtgttcaggccgcg
gcgtccgccaccgggctccaggccgtcgcgatcgggcagaatagcgtcgccgctttcggc
cggtcggtttccatgggctatgcggccgtcgcaggcagttcgtcctcggtcgctatcggc
gccagcgccacaaccggcgcgaccgggcagaacgtcgcggtcggcagcggcagtacggcc
aactccgccgcagccgctggcggcgccgtggctgtcggacgcgccaataccgcgaccggc
gacggtgcggtgtcggtcggcatgaataacaccgccacaggagacggctctgtggcgctt
ggccgtctcagtcgcgccagcgcggaggggtcgcttgcgtccggcgacagtaccaacgcc
accggccgccgcgccgtcgctctgggctcgacgtcgcaggcgacgttcgacagcgccgtg
gcgatcggcaatggtgccgaagcgggcaccggcttgggcgccgttgcaatcggtcgcctg
gccgaggccgcaggcgcaggggctatctcgctcggcaacagtgcaacagcgaccgccgag
ggagcgctggccttcggcgaaaatgcgcagagcgccggcgagaacagcatcgctatcggc
ggcgagagccaggtcaccggcgaacggtccatcgccataggcgtgggccatcaggtcacg
ggcaataattccggcgcgatcggcgatcccaacacggtcaacggcagcggctcctacgcg
ctcggcaacaacaacacgatcaactccaacaacaccttcgtcgtcggcagcaacgtgagc
gtcgccgccggcctcgacggtgcagtggcgctgggcgcgggcagcacggtgacggcatcg
agcccgactccgagcgcgacgatcaacggcacggcctataccttcgccggcggcagcccg
gcggcaggtgcggtggtgagcgtcggcgcggccggggcggagcggcagatccagaacgtc
gcggcgggccggatcagcggcggctcgaccgacgcgatcaacgggtcgcagctctatgcc
accaaccaggcggtcgacaatctcggcacgcaggtgaccaacctcgacggccgcgtgacg
acaatcgagggcgatcttaccaacatcacgaccggcggcgggatcaagtatttccacgcc
aactcggcgctgccggacagccaggcactggggacggactcggtcgcgatcggtcccaat
gcagtggccaataacgccggcgatgtcgcgatcggcctgaatgccgtgtcgggcgccacc
accgcggtcggcggggcgacgatcggcggcaccgcctacaccttcgccggggcgacgccg
agcggggccttctcgatcggcgcggccggggccgagcggcagatccagaatgtcgcggcc
ggacagttgaacggaggctcgaccgacgcggtcaatggctcccagctgttcgcgaccaac
cagaaggtggaccagaacaccaccgacatcgccaacctcgacggccgcgtgaccacggtc
gagggcgacgtgaccaatctcgacggtcgcgtgacgacgatcgagggcgatctcaccaac
atcaacaacggcggcgggatcaaatatttccacgccaactcgagcgatccggactcgcag
gcgcttgggacgaactcggtggcgatcggccccaatgcggtggccaacaacgccggcgac
attgccctcggcagcggctcgaccacggacgttgcggtggccacgggcggcacgaccatc
aacggcacggcctataccttcgcggggacgacgcccacctcgacggtgagcgtcggcgcg
gccggagccgagcggaccatcaccaacgtcgccgccggacgggtcgacggcggttcgacc
gatgccatcaacggctcgcagctgttcgccaccaaccaggccgtcgacggcctcggcacg
gaggtgaccaacctcggcaacaccgtcaccaatctgggcaacagcttcaccagtctcgac
ggccgggtgacgacggtcgagggcagcctcaccaacctcggcaacacgatcaccaacatc
gccggggataccaactcggtcttcaccgacgcgaacggtgacggcatccgctacgcccgc
accaacgagacgggcctcgcgccgaccgacgccttcgcccagggggtaggatcgacggcg
ctcggctatcaggcgcaggcgagcgccggcaatgcagtggcgctgggccgcggcgcccag
gccaccgtcgacggatcgctggcgctcggcgccggctcggtcgcggatcgcgccctggcg
ccgaccgtcggtcagatcccggcgaccaccggctacattccctacaataccagtgatcag
acgctgctcggcgccatctccgtcggcagtgccggtgcctatcgccagatcaccaacgtc
gccgacggcacccaggcgcaggatgcggtgacgatccgtcagctggcgggggcgctgtcg
tccttcgcggtgacgccgatcatgtatttccatgccaactcgacggcggcggattcgctg
gcgattggccaggaatcggtcgcgatcgggccgcagaccgtggtcaacggcaacaacggc
atcggcatgggcaatggcgcgatcgtccaggcgaccgcaccgggcggcaccgcgatcggt
cagaacgcgcaggtcgcccaggccgacgccatcgccctcggtaccaatgcccagggcaac
ggcatccagtcggtcgcgatcggcgctggggcgaacgccacccattcgggcagcgtcgcg
ctgggcgccggggcgacgacttcggtcggctccgagagcggctacaccggctatggcctc
accgcgccgcagaactcggccggcgaggtctcggtgggcagcgcgggcgccgagcggaag
gtcaccaacgtcgccgccggctcggcggcgaccgatgcggtcaacgtcagccagcttcag
gcggtcgacaacaaggtgaccaacctcgacaaccgcgtcaccaacgtcgacaaccgggtg
accgaggtcgccaacaatgtcaccaacctcggcgacagcgtcgcgaacagcttgggcggc
ggctcgacctatgatccgaccacgggcacggtgaccacccaactcaacgtcggcggcaac
acctacaacaacgtcaacgacgcgctgcagtcgctgaatcagacggcgagcgcgggctgg
aacatccaggccaacggcggtccgtcgaccaacatcgggtcgaacggcacgctcaacgtc
accgccggctccaacaccgtcgtgaccttgaacggcaaccagctccaggtcggggtggtc
gacaatccgaccttcgccggcatggtgacggcgaacggcgggcttaccgtcggtgccaac
accagcgtcaacatgggcggcaacgtcgtccagaacgtcggcgcgggcgcggtcaacgcc
acctccaccgatgcggtcaacggcgcgcagctccatcaggtgcagcaggtcgccaacaat
tcggtgcaatatgacgccgaccataattcggtgacgctcaatccgggcgggtcggcggcg
accatccacaatgtcgcggctggcgtggcgccgaccgacgcggtcaacgtccagcagctc
aacgacgggctgtcgaagacgctgcagtcggccaatgcctacaccgaccagaaggtcgcc
gggatccagtacgacctctcgcaggtccggcgcgaggccaatgccggaaccgccggcgcg
ctcgctgcggcgggcatgccgcaggcgttcgagccgggtcgcgggatgctggcgttcggc
ggcggcacctatcgcggccagtcggcattcgcgctcggcctgtcgcgggtgatggatgat
ggcgtgaccgtggtgaaggcaggcgccacctacgacacccagcaacatgtcggcgcgaac
gtcggcgtcggcttccagttctga
DBGET
integrated database retrieval system
