KEGG   Sphingomonas cannabina: LZK98_00960
Entry
LZK98_00960       CDS       T08607                                 
Symbol
trbB
Name
(GenBank) P-type conjugative transfer ATPase TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
scab  Sphingomonas cannabina
Pathway
scab02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:scab00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    LZK98_00960 (trbB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:scab02044]
    LZK98_00960 (trbB)
Enzymes [BR:scab01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     LZK98_00960 (trbB)
Secretion system [BR:scab02044]
 Type IV secretion system
  Trb secretion system protein
   LZK98_00960 (trbB)
SSDB
Motif
Pfam: T2SSE Zeta_toxin FtsK_SpoIIIE AAA_16 TrwB_AAD_bind AAA_19 ABC_tran AAA_29 DUF815 nSTAND3 nSTAND_NTPase5 cobW DEAD DUF87 AAA_22 ATPase CbiA MMR_HSR1 RsgA_GTPase Septin ResIII AAA_7 P-loop_TraG NACHT ABC_ATPase MobB AAA_25 AAA_28 PduV-EutP SLFN-g3_helicase AAA_10 GTP_EFTU AAA_23 TsaE ATP_bind_1 Sigma54_activat SRPRB Pox_A32 ArnB_C SRP54 Viral_helicase1 AAA_30 Dynamin_N UvrD-helicase
Other DBs
NCBI-ProteinID: UIJ45565
LinkDB
Position
complement(194526..195512)
AA seq 328 aa
MTVHPIRSEAKTRGARMLRTALGPSIAAWLDDAAVIEVMLNPDGRLWVDRLGEGISDTGM
KLAAADGERIVRLVAHHVGVEVHARSPRVSAELPEGGERFEGLLPPVVVAPAFAIRKPAV
AVFTLDEYAAAGIMSPAEAAALRDGVAARANILVAGGTGSGKTTLVNALLAEVAKTTDRI
VLIEDTRELQCAAPNLVAMRTKDGVVTLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
GTGHPGGIGTIHAGTALGALRRMEQLIQEAVVTVPRALLAETIDLIAVLVRDGHGRRLAE
LARVEGIDAETGDYRLTPLAPPNLGDAP
NT seq 987 nt   +upstreamnt  +downstreamnt
ttgaccgtccatccgatccgttccgaggcgaagacacgcggcgcgcggatgctgcgcacg
gcgctcggcccgtcgatcgcggcctggctcgacgatgccgccgtcatcgaggtgatgctg
aacccggacggccggctgtgggtcgatcggctcggcgaaggcatcagcgacaccggcatg
aagctggccgccgcggacggcgagcgcatcgttcgcttggtcgcgcaccatgtcggcgtc
gaggttcatgcccggtccccgcgcgtctcggccgagctgcccgaaggaggggagcggttc
gaggggttgctgccccccgtcgtcgtcgcgcccgccttcgcgatccgcaagcccgccgtc
gccgtcttcacgctcgatgaatacgcggcggccgggatcatgtcgccggccgaggccgcg
gcgctgcgtgatggcgtcgccgcccgcgccaacatcctcgtggcaggcgggaccggcagc
ggcaagaccacgctggtcaatgcgctcctggccgaagtcgccaagaccaccgaccgcatc
gtcctgatcgaagacacgcgcgagcttcagtgcgccgcgccgaacctcgtcgccatgcgg
accaaggatggcgtcgtcacgctgtccgatctcgtgcggtccagcctgcggctgcgcccc
gaccgcatccccatcggcgaggtgcgcggcgccgaggcgctcgacctcctcaaagcctgg
ggcactggccaccccggcggcatcggcaccatccacgccgggaccgcgctcggggcgctg
cgccgcatggagcagctcattcaggaggccgtcgtcacggttccccgcgcgctgctcgcc
gagaccatcgacctgatcgccgtgctggttcgcgacgggcacggtcgccgcctcgccgag
ctggctcgcgtcgaggggatcgacgccgagaccggcgattaccgcctgacccccctcgca
ccccccaacctcggagacgcaccatga

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