Sphingomonas cannabina: LZK98_01295
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Entry
LZK98_01295 CDS
T08607
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
scab03021
]
LZK98_01295 (nusA)
03009 Ribosome biogenesis [BR:
scab03009
]
LZK98_01295 (nusA)
Transcription machinery [BR:
scab03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LZK98_01295 (nusA)
Ribosome biogenesis [BR:
scab03009
]
Prokaryotic type
rRNA transcription factors
LZK98_01295 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
KH_2
S1
KH_1
KH_NusA_C
Motif
Other DBs
NCBI-ProteinID:
UIJ45628
LinkDB
All DBs
Position
251974..253599
Genome browser
AA seq
541 aa
AA seq
DB search
MATAISANKAELIAIADSVAKEKLIDKAIVIEAMEDAIQRAAKNRYGAENDIRAKLDPNT
GDLRLWRVVEVVEAVDDYFKQVSVKDAQKLQAGAAVGDFIVDPLPPIEFGRIQAQASKQI
IFQKVRDAERERQYEEFKDRVGEIIIGVAKRVEFGHVVVDLGRAEGVIRRDQQIPREVVR
VGDRVRSIILNVRRENRGPQIFLSRAHPDFMKKLFAQEVPEIYDGIIEIKAAARDPGSRA
KIGVISHDSSIDPVGACVGMKGSRVQAVVQEMQGEKIDIIPWSPDTATFVVNALQPANVA
RVVIDEEDDRIEVVVPDDQLSLAIGRRGQNVRLASQLTGKGIDILTETDASEKRQQEFVR
NSETFQNELDVDETLAQLLVAEGFSELEEVAYVELDELASIEGFDDELAQELQSRAQEAL
ERREEANREQRRALGVEDDLATMPYLTEAMLVTLGKAGIKTLDDLADLATDELIAKKRAE
PRRRSENAPPAREQDKGGVLGEYGLSEEQGNEIIMAARAHWFTDEEPAPAGEEDAHAESS
Q
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggccaccgccatttccgccaacaaggccgagctgatcgcgatcgccgattcggtcgcc
aaggagaagctgatcgacaaggccatcgtcatcgaggcgatggaggacgcgatccagcgc
gccgccaagaaccgctacggcgccgagaacgacatccgcgccaagctcgaccccaacacc
ggcgacctgcgcctgtggcgcgtggtcgaggtggtcgaggcggtcgacgattatttcaag
caggtctcggtcaaggacgcacagaagctccaggcgggcgccgcggtcggcgacttcatc
gtcgatccgctgccgccgatcgagttcggccgcatccaggcgcaggcctccaagcagatc
atcttccagaaggtccgcgacgccgagcgcgagcgccagtatgaggagttcaaggaccgc
gtcggcgagatcatcatcggcgtcgccaagcgcgtcgagttcggccacgtcgtcgtcgat
ttgggccgcgccgagggcgtgatccgccgcgaccagcagatcccgcgcgaggtggtgcgc
gtcggcgaccgcgtgcgctcgatcattctcaacgtccgccgcgagaaccggggaccgcag
atcttcctctcccgcgcgcaccccgacttcatgaagaagctgttcgcgcaggaagtgccc
gagatctacgacggcatcatcgagatcaaggcggccgcgcgcgacccgggcagccgcgcc
aagatcggcgtcatctcgcacgattcgagcatcgacccggtcggcgcctgcgtcggcatg
aagggcagccgcgtccaggcggtcgtccaggagatgcagggcgagaagatcgacatcatc
ccctggtcgcccgacaccgcgaccttcgtcgtcaacgcgctgcagccggccaacgtcgcg
cgcgtggtgatcgacgaggaggacgaccgcatcgaggtggtggtccccgacgaccagctc
agcctggcgatcggccgccgcggccagaacgtgcgcctcgccagccagctcaccggcaag
ggcatcgacatcctcaccgagaccgacgccagcgagaagcgccagcaggagttcgtccgc
aactccgagacgttccagaacgagctcgacgtcgacgagacgctggcgcagctcctcgtc
gccgagggcttcagcgagctcgaggaggtcgcctatgtcgagctcgacgagctcgcctcg
atcgagggcttcgacgacgagctcgcgcaggagctgcagagccgcgcgcaggaagcgctc
gagcgccgcgaggaggcgaatcgcgagcagcgtcgcgcgctcggcgtcgaggacgatctc
gccaccatgccgtacctcaccgaggcgatgctggtgacgctcggcaaggcgggcatcaag
acgctcgacgacctcgccgatctcgccaccgacgagctgatcgccaagaagcgcgccgag
ccgcgccgccgcagcgagaacgccccgcccgcccgcgaacaggacaagggcggcgtgctc
ggcgagtacggtctcagcgaagagcagggcaacgagatcatcatggccgcccgcgcccac
tggttcaccgacgaggagcccgcgccggcgggtgaggaggacgcgcatgcggaatcctcg
caatga
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