Sphingomonas cannabina: LZK98_01775
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Entry
LZK98_01775 CDS
T08607
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
scab
Sphingomonas cannabina
Pathway
scab03030
DNA replication
scab03430
Mismatch repair
scab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LZK98_01775 (dnaQ)
03430 Mismatch repair
LZK98_01775 (dnaQ)
03440 Homologous recombination
LZK98_01775 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scab03032
]
LZK98_01775 (dnaQ)
03400 DNA repair and recombination proteins [BR:
scab03400
]
LZK98_01775 (dnaQ)
Enzymes [BR:
scab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LZK98_01775 (dnaQ)
DNA replication proteins [BR:
scab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LZK98_01775 (dnaQ)
DNA repair and recombination proteins [BR:
scab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LZK98_01775 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UIJ45716
LinkDB
All DBs
Position
complement(346989..347675)
Genome browser
AA seq
228 aa
AA seq
DB search
MREIVFDTETTGLSFAGGDRLVEIGCVELINKVETGRTFHAYINPERAMAAEAQAVHGLS
DAFLADKPVFASLVGELLEFLGDAPLVAHNAGFDFSFLNGELGRCGHPEVCRTRMIDTLV
LARTKHPGAKHTLDALCTRYGIDRSHRVLHGALLDAQLLAQVYVELSGGRQIGLGLAVDV
ETVEVAAPVTRAVVRPARPHAASEEELARHAEFLTTVKEPLWGSPALG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagatcgtgttcgacaccgagaccaccggcctcagcttcgccggtggcgaccgg
ctggtcgagatcggctgcgtggagctgatcaacaaggtcgagaccggccgcaccttccac
gcctatatcaatcccgagcgcgcgatggcggccgaagcgcaggcggtgcacggcctaagt
gacgccttcctcgcggacaagccggtgttcgcctcgctggtcggcgagctgctggagttc
ctcggcgacgcgccgctggtcgcgcacaacgccgggttcgacttcagcttcctgaacggc
gagctcggccgctgcggccatcccgaagtgtgccgcacgcggatgatcgacacgctggtg
ctagcgcggacgaagcatccgggcgccaaacacacgctcgacgccctctgcacgcgttac
ggcatcgatcgcagccaccgtgtgctccacggggcgctgctcgacgcgcagctgctcgcg
caggtctatgtcgagctgtccggcggacggcagatcgggctgggcctcgcggtcgatgtc
gagacggtggaggtcgcggcgccggtgacgcgcgccgtggtgcggccggcgcggccgcac
gccgccagcgaggaagaacttgcgcgccacgccgagttcctgacgacggtcaaggaaccg
ttatgggggtctccggcgttgggatga
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