Sphingomonas cannabina: LZK98_01835
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Entry
LZK98_01835 CDS
T08607
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scab03016
]
LZK98_01835 (mnmE)
Transfer RNA biogenesis [BR:
scab03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LZK98_01835 (mnmE)
Prokaryotic type
Methyltransferases
LZK98_01835 (mnmE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
ABC_tran
Dynamin_N
AAA_28
AAA_29
AAA_25
RsgA_GTPase
HflX_C
DUF4349
Arf
G-alpha
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UIJ45727
LinkDB
All DBs
Position
355937..357214
Genome browser
AA seq
425 aa
AA seq
DB search
MSDTIFALSSGTPPAAIAIIRLSGAGAFAAVKALAGRLPGPRSAALRSLRDPATGALLDR
ALVLLFPGPDSATGEDVAELHLHGGRAVVRAVDAVLAAMPGLRAAEPGEFTRRALANGRI
DLTEAEGLADLLAAETEAQRRSAIASAEGGLRRQVEQWSARTVTLAARIEAAIDHEDEGD
VEAESIATGVREDAGTLAREIEAMLVQPPAERLHEGIRVVLAGPPNSGKSTLLNAMAGRE
AAIVSPIAGTTRDRIEAPVTRRGIAWLLTDTAGLAAETDDPIEAIGIARAREAAALADIV
LWLGDEAPPEPAMLAIHPRADARPSRPERLAISAATGEGMEALWDVLVERATTLLPVPDA
VALNRRQAELASAAAAALDFAAVASDPLLIAEELRHALVQFDRLTGRAGVENVLDDLFSR
FCIGK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacaccatcttcgcgctgtcgagcggcacgccgccggcagcgatcgcgatcata
cggctgagcggggcgggggcctttgcggcggtcaaggcattggcgggtcggctgcccgga
ccgcgctccgccgcgttgcgctcgctccgtgatccggcgacaggtgccctgctcgatcgc
gcgctggtcctgctgtttcccggtcccgacagtgcgacaggcgaggacgttgccgagctg
caccttcatggcggccgcgcggtggtgcgtgccgtcgatgccgtgctggcggcgatgccg
ggtctgcgtgcggcagagcccggtgaattcactcgccgtgcgctcgccaatggccgtatc
gatctcaccgaggccgagggtcttgccgatctccttgctgccgagaccgaagcgcagcgt
cggtccgccatcgccagcgccgaaggcgggctgcgtcgccaggtcgagcaatggagcgcg
cggacggtgacgctcgccgcacggattgaagcggcgatcgaccatgaggacgaaggtgac
gtcgaggcggaatcgatcgccaccggcgttcgcgaggacgcggggacgctggcgcgcgag
atcgaggcgatgctggtgcaaccgccggcggagcgattgcacgaaggcatccgtgtcgtc
ctcgccggaccaccgaacagcggcaaatcgactctgctcaatgcgatggccgggcgggag
gccgcaatcgtctcgccgatcgccggcacgacacgcgatcgcatcgaggcgccggtgaca
cggcgaggcatcgcctggctgctcaccgataccgccggtctcgccgccgagaccgatgac
ccgatcgaggcgatcgggatcgcgcgcgcgcgcgaggcggcggcgctcgccgatatcgtg
ctgtggctgggggacgaggcgccgcccgagccggcgatgctggccatccacccgcgtgct
gatgcgcgtccctctcgtccggaacgccttgcgatctcggcggcgacgggggaagggatg
gaggcgctgtgggacgttctggtcgagcgggcgacgacgctgttgcccgtgcccgatgcg
gtcgctctcaaccggcggcaggcggagctggccagcgccgccgccgcggcgctggacttc
gccgctgtggcgtccgacccgctgctgatcgccgaggaactgcgtcacgcgcttgttcag
ttcgaccggcttaccggacgggcaggcgtggagaatgtcctcgacgatctgttcagccgc
ttctgcatcggcaagtga
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