Sphingomonas cannabina: LZK98_02110
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Entry
LZK98_02110 CDS
T08607
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
scab03036
]
LZK98_02110 (smc)
Chromosome and associated proteins [BR:
scab03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
LZK98_02110 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
ABC_tran
AAA_29
Motif
Other DBs
NCBI-ProteinID:
UIJ45779
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All DBs
Position
416160..419573
Genome browser
AA seq
1137 aa
AA seq
DB search
MRIKRLRLTGFKSFVDPADLRIEPGLTGVVGPNGCGKSNLLEALRWVMGETSAKSMRGAG
MEDVIFAGTASRPPRDFAEVSILADEVAGEGGEGDGELEVVRRIERGAGSAYRINGRDVR
AKDVALAFADAATGAHSPALVSQGRIGAIIQAKPAERRAMLEEAAGIAGLHVRRKDAEQK
LRATETNLARLDEVISDQEARAAALKRQARQAERYRTLSATIRVAEARMIFARWRDAAAA
ADAAKAEAAAAEALVAERGEASRMAEAAQAKATELLVVARSAALAARDQASEAGHKLAGL
RAERDSAERRLVELQDTARRLVDDRAREGALAHDAAEALERLGEESKALEARIAEGTDRL
PALEAALAEAERGARDAEVALAQALAEQAAEAADARVADAALAAARQRRDRSQRDKAALA
AETARLADPEPLKAERKRAAEERAKCQRHAEQARTALARADAEERGAIAGRDHAQNARAE
AHAELAALDSEAAALAKATRTTGGDKLLDQLRPDPGYERALAAALGDDLEAGLDAKADRY
WAGAEPLPDDPVAASPLADHVKAPAALARRLRQILVVESDDGRPLAVGQRLVTLAGVLRR
WDGYVARQGGAAAAERLQRLNRLRAIEAARPAAVRAVETADAELARIDATIAEARRAAAD
ARRLLDSAEAGAREAARGEDRATAALERAEAQRADLDARRQRVEAEGAEAEAEFARAEAA
IAALPDGAATRARVAALTGDAEAARAAVATARAERAAHDRAVSDARARLAAAAAEAKGWK
SRAGEAARRIAEMGTREASLAEEIAALSTRPAALAREIARVEAGHAELRAAADRALEGER
AAEAEVRAQEAAARVIAEALAEAREARAGAVARAENQEARRVEMGRLSGERFECPPPLLP
QRIEFAEADVGAPVDESARHERLLAERERIGPVNLVAESELAELEAASTTNAAERDELIQ
AVHRLRGSIGTLNREGRQRLLAAFEAVDGHFRRLFTTLFNGGQAHLELVDSDDPLEAGLE
IMAQPPGKRLQSLTLLSGGEQALTAVALIFALFLTNPAPICVLDEVDAPLDDANVDRFCD
LLDRMIEETDTRYLIVTHNAATMSRMHRLFGVTMVEKGVSRLVSVDLGGAERLLAAE
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgcggatcaagcggctcaggctgaccggcttcaagagcttcgtcgacccggcggacctc
cggatcgagcccgggctgaccggcgtggtcggtcccaacggctgcggcaagtccaacctg
ctcgaggcgctgcgctgggtgatgggcgagaccagcgccaagtcgatgcgcggcgccggc
atggaggacgtgatcttcgccggcaccgccagccggccgccgcgcgacttcgccgaagtg
tcgatccttgccgatgaggtggcaggtgaggggggcgaaggcgacggcgagttggaggtg
gtgcggcggatcgagcgcggcgccggctccgcctatcgcatcaacggccgcgacgtgcgc
gccaaggacgtcgcgctcgccttcgccgacgccgcgaccggcgcgcattcgccggcgctg
gtgagccagggccggatcggcgcgatcatccaggccaagcccgccgagcgccgcgcgatg
ctggaggaggcggcgggcatcgccggcctgcacgtccgccgcaaggacgccgagcagaag
ctgcgcgcgaccgagaccaacctcgcccggctcgacgaggtgatctccgaccaggaggcg
cgcgccgccgcgctgaagcgccaggcgcggcaggcggagcgctaccgcaccctctccgcc
accatccgcgtcgccgaggcgcggatgatcttcgcgcgctggcgcgatgccgccgccgcc
gccgatgccgccaaggccgaggccgccgccgccgaggcgctggtcgccgagcgcggcgag
gcgtcgcgcatggccgaggcagcgcaggccaaggcgaccgagctgctggtggtggcgcgc
tccgcggcgctggccgcgcgcgaccaggcgagcgaggcggggcacaagctcgccgggctg
cgcgccgaacgcgacagcgccgagcggcggctggtcgagctgcaggacacggcgagacgc
ctggtcgacgaccgcgcgcgcgagggggcgctggcgcatgacgccgccgaggcgctcgag
cggctgggggaggaaagcaaggcgctcgaggcgcgcatcgccgaaggcacggaccgcctg
ccggcgctggaggccgcgctcgccgaagccgagcgcggcgcgcgcgatgccgaggtggcg
ctggcgcaggcattggccgagcaggcggccgaggcggcggacgccagggtcgccgacgcc
gcgctcgccgccgcacgccagcggcgcgaccgttcgcagcgcgacaaggccgcgctggcg
gcggagacggcgcggctcgccgatcccgagccgctcaaggccgagcgcaagcgcgccgcc
gaggagcgcgcgaagtgccagcgccatgccgagcaggcgcgcaccgcgctcgcccgcgcc
gacgccgaggagcgcggtgcgattgccgggcgcgatcatgcgcagaatgcccgcgccgag
gcgcatgccgagctcgccgcgctcgacagcgaggcggcggcgctggccaaggcgacgcgg
acgacaggcggggacaagctgctcgaccagctccgccccgatccgggctatgagcgcgcg
ctggcggcggcgctgggcgacgatctcgaggccgggctcgatgccaaggccgatcgctac
tgggcgggcgccgagccgctgcccgacgatccggtggcggcgagtccgctcgccgatcac
gtcaaggctcccgcggcgctggcgcggcggctgcggcagatcctggtggtggagagcgac
gacggccggccgctcgccgtcggccagcggctggtgacgctggccggggtgctgcggcgc
tgggacggctatgtcgcgcgccagggcggcgcggcggcggccgagcggctgcagcggctc
aaccgcctgcgcgcgatcgaggcggcgcggccggcggcggtgcgcgcggtcgagactgct
gacgccgagctcgcccggatcgacgccaccatcgccgaggcgcgccgcgccgccgccgac
gcccggcggctgctcgattcggccgaagccggcgcgcgcgaggccgctcgcggcgaggac
cgcgccaccgccgcgctcgaacgcgccgaggcgcagcgcgccgatctcgatgcacggcgc
cagcgggtcgaggccgagggtgccgaggccgaagccgaattcgcccgcgccgaagctgcg
atcgccgcgctccccgatggcgccgccacccgcgcacgcgtcgccgcgctgaccggcgat
gccgaggctgcgcgcgcggcggtcgccaccgctcgcgccgagcgggcggcgcacgaccgc
gccgtctccgacgcgcgcgcgcgcctcgccgccgcggcggccgaggcgaagggctggaaa
tcacgcgccggcgaggccgcgcgccgcatcgccgagatgggcacgcgcgaggcgagcctg
gcggaggagatcgcggcgctgtccacccgccccgccgcgctcgccagggagatcgcgcgg
gtcgaggccggccatgccgagctgcgcgccgccgcggaccgggcgctcgaaggcgagcgc
gcggccgaggccgaggtccgcgcgcaggaggccgccgcccgcgtcatcgccgaggccctg
gcggaagcgcgcgaggcccgtgccggcgcggtggcgcgcgcggagaaccaggaagcgcgg
cgggtcgagatgggacgcctctcgggcgagcgtttcgaatgcccgccaccgctgctgccg
cagcgtatcgagttcgccgaggccgatgtcggcgcgcccgtcgacgaatccgcccgccac
gagcggctgctcgccgagcgcgagcggatcgggccggtcaatctcgtcgccgagagcgag
ctcgccgagctggaggccgccagcaccaccaacgccgccgagcgcgacgagctgatccag
gcggtccatcgcctgcgcggctcgatcggcaccctgaaccgcgaggggcggcagcggctg
ctcgcggcgttcgaggcggtggacgggcacttccggcggctgttcacgacgctgttcaac
ggcggccaggcgcatctcgagctcgtcgattcggacgatccgctcgaggcggggctggag
atcatggcgcagccgccgggcaagcggctgcagtcgctgactctgctgtcgggcggcgag
caggcgctgaccgcggtcgcgctgatcttcgcgctgttcctcaccaatccggcgccgatc
tgcgtgctcgacgaggtcgacgcgccgctcgacgacgccaatgtcgaccgcttctgcgac
ctgctcgaccgcatgatcgaggagaccgatacccgctacctcatcgtcacccacaatgcc
gcgacgatgagccggatgcaccggctgttcggcgtgacgatggtcgagaagggagtgagc
cggctggtctcggtcgacctcggcggcgcggaacggctgctggcagcggagtga
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