Sphingomonas cannabina: LZK98_02900
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Entry
LZK98_02900 CDS
T08607
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scab02000
]
LZK98_02900
Transporters [BR:
scab02000
]
Other transporters
Pores ion channels [TC:
1
]
LZK98_02900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
UIJ45918
LinkDB
All DBs
Position
complement(569089..571446)
Genome browser
AA seq
785 aa
AA seq
DB search
MIRTPSVRTLVLFGTSLAALAAAPAWAQEAPSVADEQAAEPASDADIVVTARRREESLLD
VPVAVTAFTADKLAKSGAIDITDLQNTVPNTTLKVARGTNSTLSAFIRGVGQQDPVPGFE
SGVGIYLDDVYLNRPQAAVLDIYDVERIEVLRGPQGTLYGRNTIGGAVKYVTRRLPDDLE
VKIKGTYGSYDQLDGIISVSAPIGSMFKVGGSVARLTRDGFGRNRNLGIDNYDKDIWAGR
GTIEFETPDERLFIRLTGDYTKDKSSPRNGHRLIPGLVSGLPVLDDVYDTMAGLANPKQD
IEAGGLSLSATAKLTDTLTLRSISAWRKDRSYTPIDFDSNPAADVDVPAVYRNEQTSQEF
QLLYDSDKLNGIVGFYYLGAKAETRFDVLLFTTGAVSNLPGLDGFTAGEVATETSSVYAD
FTYDFTPQISLSLGGRYTWDERQSHIYKANLLNGPSRFFGGSPTVLAVATDFRGRARFTR
FTPRASFSFKPTEDHMLYASYSEGFKGGGFDPRGSGTSAPKPPTQPAPTYQEIYDYLSFD
PETVKSYEIGWKGAAFDRRLTWALDGFYSKYSDVQVPGSVGCFIGTTPSFCGITTNAARA
TIKGVEFEGNAVLARGFAGGGSSFSLAGTLGYIDAKYKEFIGPTGTDVADYRYFQNTPKW
TASGTATLNLPVGPGLVTANTTVSYRSLTHQFETASPFLDQPGYTLWDAGITYAWGNYSI
GIYGRNLTDERYKTGGYQYIRVNPETGVPILSPTGNYQSSLGLDGIATAFYGNPRQVFGS
FTIKF
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcacgccgtccgtccgcacgcttgtcctgttcggcacgagcctcgccgcgctc
gccgccgcaccggcgtgggcgcaggaagcgccttcggtcgcggacgagcaggccgccgaa
cccgccagcgacgcggacatcgtcgtcaccgcccgccgccgcgaggaatcgttgctcgac
gtgccggtcgcggtcaccgccttcactgccgacaagctcgccaaatcgggcgcgatcgac
atcaccgacctccagaacaccgtccccaacaccacgctcaaggtggcgcgcggcaccaat
tcgacgctatcggccttcatccgcggcgtcggccagcaggatcctgtgccggggttcgaa
tcgggcgtcggcatctacctcgacgacgtctatctgaaccgcccgcaggcggcggtgctc
gacatctacgacgtcgagcggatcgaggtgctgcgcggaccgcagggcacgctctatggc
cgcaacaccatcggcggcgcggtcaagtacgtgacgcggcgcctgcccgacgatctcgag
gtgaagatcaagggcacctacggcagctacgaccagctcgacggcatcatcagcgtatcg
gcgccgatcggatcgatgttcaaggtcggcggatcggtcgcgcggctgacccgcgacggc
ttcggccgcaaccgcaacctcggcatcgacaactacgacaaggacatctgggccggccgc
ggcaccatcgagttcgagacgcccgacgagcggctcttcatccgcctgaccggcgactat
accaaggacaagtcgtccccccgcaacggccaccggttgatccccggcctcgtctccggc
ctgccggtgctcgacgacgtctatgataccatggccgggctcgccaatccgaagcaggac
atcgaggcaggcggtctgtcgctgtccgccaccgccaagctcaccgacacgctgacgctg
cgcagcatcagcgcgtggcgcaaggaccggtcgtacacgccgatcgacttcgattcgaat
ccggcggccgatgtcgatgtgcccgcggtctaccgcaacgagcagaccagccaggaattc
cagctgctctacgacagcgacaagctgaacggcatcgtcggcttctactatctcggcgcc
aaggccgagacgcggttcgacgtgctgctgttcaccacgggcgcggtgtcgaacctgccg
ggcctcgacggcttcaccgcgggcgaggtcgcgaccgagacctcctcggtctatgccgat
ttcacctatgacttcacgccgcagatcagcctgtcgctcggcggccgctacacctgggac
gagcgccagagccacatctacaaggccaatctgctgaacggtccgagccggttcttcggc
ggctcgcccacggttctcgccgtcgcgaccgatttccgtgggcgcgcccggttcacgcgc
ttcaccccgcgcgcctcgttcagcttcaagccgaccgaggatcacatgctctacgcctcc
tattcggaaggcttcaagggcggcggcttcgacccgcgcggatcgggaacctcggccccc
aagcctccgacgcagcccgcccccacctatcaggaaatctacgattatctctctttcgat
ccggagacggtgaagagctacgagatcggctggaaaggcgcagcgttcgaccggcggctg
acctgggcgctcgacggcttctattccaagtacagcgacgtgcaggtgccgggctcggtc
ggctgcttcatcggcaccacgcccagcttctgcggcatcaccaccaatgcggcgcgcgcg
acgatcaagggcgtcgagttcgagggcaacgccgtgctggcgcgcggcttcgcgggcggg
ggatcgtcgttcagcctggccggcacgctcggctacatcgacgccaagtataaggagttc
atcggcccgactggtaccgacgtcgcggattaccgctatttccagaacacccccaaatgg
accgcctccggcaccgcgacgctcaacctgccggtggggccggggctggtgaccgcgaac
accaccgtctcctaccgcagcctcacccatcagttcgagacggcgagcccgttcctcgac
cagccgggctatacgctgtgggatgccggcatcacctatgcctggggcaactattcgatc
ggcatctacggccgcaacctaaccgatgagcgatacaagaccggcggctaccaatatatc
cgcgtcaatcccgagaccggcgtgccgatcctcagcccgaccggcaactaccagtcgtcg
ctgggcctggatggcatcgccaccgccttctacggcaatccgcgccaggtcttcggcagc
ttcacgatcaagttctga
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