Sphingomonas cannabina: LZK98_03020
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Entry
LZK98_03020 CDS
T08607
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00020
Citrate cycle (TCA cycle)
scab00190
Oxidative phosphorylation
scab00650
Butanoate metabolism
scab00720
Other carbon fixation pathways
scab01100
Metabolic pathways
scab01110
Biosynthesis of secondary metabolites
scab01120
Microbial metabolism in diverse environments
scab01200
Carbon metabolism
Module
scab_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scab_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
scab_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LZK98_03020
00650 Butanoate metabolism
LZK98_03020
09102 Energy metabolism
00190 Oxidative phosphorylation
LZK98_03020
00720 Other carbon fixation pathways
LZK98_03020
Enzymes [BR:
scab01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
LZK98_03020
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_17
Fer4_8
Fer4_10
Fer2
Fer4_7
Fer4_9
Motif
Other DBs
NCBI-ProteinID:
UIJ45941
LinkDB
All DBs
Position
601418..602200
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AA seq
260 aa
AA seq
DB search
MAQFTLPTNSTIKKGKEHKAAPEAKRVKRFKIYRYDPDSGENPRYDTFEIDLDQCGPMVL
DALIKIKSEIDPSLTFRRSCREGICGSCSMNMDGRNGLACTTAIEDIKGEIRITPLPAMD
VIKDLVPDFTHFYAQYASIKPWLQTVTPPPAGKERLQSPEDREKLDGLYECILCACCSTS
CPSYWWNSDRFLGPAILLQAYRWLADSRDEMTGERLDALEDPFRLYRCHTIMNCANVCPK
GLSPAKAIAEIKKMEAERVI
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcgcagttcacgctccccacgaattcgacgatcaagaagggcaaggagcacaaggcc
gcgcccgaggccaagcgggtgaagcgcttcaagatctaccgctacgatcccgacagcggc
gagaatccgcgctacgacacgttcgagatcgacctcgaccagtgcggcccgatggtcctc
gacgcgctgatcaagatcaagtcggagatcgaccccagcctcaccttccgccgttcgtgc
cgcgagggcatctgcggctcgtgctcgatgaacatggacgggcgcaacggcctcgcctgc
accaccgcgatcgaggacatcaagggcgagatccgcatcaccccgctgccggcgatggac
gtgatcaaggacctggtgcccgacttcacccatttctacgcgcagtacgcctcgatcaag
ccgtggctgcagacggtcacgccgccgcccgccggcaaggagcggctgcagtcgccggag
gatcgcgagaagctcgacggcctctacgagtgcatcctgtgcgcctgctgctcgacctcg
tgcccgagctattggtggaactccgaccgcttcctcggcccggcgatcctgctccaggcc
tatcgctggctcgccgacagccgcgacgagatgaccggcgagcgcctcgacgcgctcgag
gacccgttccgcctctaccgctgccacacgatcatgaactgcgcgaacgtctgccccaag
ggcctctcgcccgccaaggcgatcgccgagatcaagaagatggaagccgagcgggtcatc
tga
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