Sphingomonas cannabina: LZK98_03045
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Entry
LZK98_03045 CDS
T08607
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00020
Citrate cycle (TCA cycle)
scab00640
Propanoate metabolism
scab00660
C5-Branched dibasic acid metabolism
scab00720
Other carbon fixation pathways
scab01100
Metabolic pathways
scab01110
Biosynthesis of secondary metabolites
scab01120
Microbial metabolism in diverse environments
scab01200
Carbon metabolism
Module
scab_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scab_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LZK98_03045 (sucD)
00640 Propanoate metabolism
LZK98_03045 (sucD)
00660 C5-Branched dibasic acid metabolism
LZK98_03045 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
LZK98_03045 (sucD)
Enzymes [BR:
scab01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
LZK98_03045 (sucD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
UIJ45946
LinkDB
All DBs
Position
605346..606230
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AA seq
294 aa
AA seq
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MSILVDKSTKVITQGMTGETGTFHTQQALAYGTQMVAGVTPGKGGTEHIGLPVFDTVAEA
VSKTGASASVIYVPPPFAADSILEAIDAEVPLVVCITEGIPVLDMVKVKRALSGSKTRLI
GPNCPGVLTPGECKIGIMPGSIFSKGSVGVVSRSGTLTYEAVFQTTNAGLGQTTAVGIGG
DPVNGTNFIDVLELFLADDATQSIIMIGEIGGSAEEEAAQFLKDEARRGRSKPMVGFIAG
RTAPPGRRMGHAGAIVSGGKGGAEDKIAAMEAAGIRVADSPSELGTTLVEVLKG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagcatcctcgtcgacaagagcaccaaggtcatcacccagggcatgaccggtgagacc
ggcaccttccacacccagcaggcgctggcctatgggactcagatggtcgccggcgtcacc
cccggaaagggcggcaccgagcacatcggcctccccgtgttcgacaccgtcgccgaggcg
gtgtccaagaccggcgccagcgcgagcgtgatctacgtgccgccgcccttcgccgccgac
tcgatcctcgaggcgatcgacgccgaggtgccgctggtggtgtgcatcaccgaaggcatt
ccggtgctcgacatggtcaaggtcaagcgcgccctgtcgggttccaagacccggctgatc
ggccccaactgccccggcgtgctgaccccgggcgagtgcaagatcggcatcatgccgggc
tcgatcttctccaagggatcggtgggcgttgtaagccgctcgggcacgcttacctatgag
gccgtgttccagaccaccaatgcggggctcggccagaccaccgcggtcggcatcggcggc
gatccggtcaacggcaccaacttcatcgacgtgctcgagctgttcctcgccgacgacgcc
acccagtcgatcatcatgatcggcgagatcggcggctcggccgaggaggaagcggcgcag
ttcctcaaggatgaggccaggcgcggccgaagcaagccgatggtcggcttcatcgccggc
cgcaccgcgcctccgggccgccgcatgggccacgccggcgcgatcgtctcgggcggcaag
ggcggcgccgaggacaagatcgcggcgatggaagcggcgggcatccgcgtcgcggattcg
ccgtcggagctcggcaccacgctggtcgaggtgctgaagggttaa
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