Sphingomonas cannabina: LZK98_03205
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Entry
LZK98_03205 CDS
T08607
Name
(GenBank) cisplatin damage response ATP-dependent DNA ligase
Organism
scab
Sphingomonas cannabina
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
Motif
Other DBs
NCBI-ProteinID:
UIJ45977
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Position
640914..642488
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AA seq
524 aa
AA seq
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MRAFADLLDRLIYTRSRNAKLKLIGDYLRATPDPDRGWAMAALTGELDLPAVKPAIIRAM
VDERVDPVLFRMSRDFVGDSAETIALIWPEPEVPAIGEPLRLADAIERLGHLSRSDTPAV
LGAMLDRLEADERFALLKLATGALRVGVSARLAKTALAEAFGVDVDAVEEVWHGLAPPYT
ALFDWVEGRAEQPTAANVPVFRPFMLAHPLEALELDLADYAAEWKWDGIRTQLVHVAGET
RLYSRAGDDITHSFPEVAAAFRTPGVLDGELLVKGEFQGGEAASFNALQQRLGRKAVSAR
TLAEYPAFVRLYDILFDGPEDLRELPWSERRGRLERFAGRLDPASFDVSPLIDATDFAHL
GEIRAGARDSAIEGVMLKRRDSPYVAGRRTGLWYKWKRDPLTADCVMMYAQRGNGRRSSF
YSDYTFGCWSKDGELLPVGKAYSGITDEELKWLDRFVRNHTVNRFGPVREVEKTLVLEVA
FDSIHLSKRHKSGVAMRFPRIHRIRDDKPAAEADTLEALKRLVT
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccttcgccgacctgctcgatcgcctgatctacacgcgctcgcgcaacgccaag
ctcaagctgatcggcgactatctccgcgccacgcccgatcccgatcgcggctgggcgatg
gcggcgctgaccggcgagctcgacctgccggcggtcaagcccgcgatcattcgcgccatg
gtcgacgagcgggtcgatccggtgctgttccgcatgagccgcgacttcgtcggcgattcg
gccgagacgatcgcgctgatctggcccgagccggaggtgccggcgatcggcgagccgctg
cgcttggcggacgcgatcgagcggctcggccacctgtcgcgctccgacacgccggcggtg
ctgggcgcgatgctcgaccggctcgaggccgacgagcggttcgcgctgctcaagctcgcc
accggcgcgctgcgcgtcggcgtctccgcgcggctcgccaagaccgcgctcgccgaggcc
ttcggggtcgacgtcgatgcggtcgaggaggtgtggcacggcctcgcgccgccttacact
gcgctgttcgactgggtcgaaggacgggcggagcagccgacggcggcgaacgtgccggtc
ttccgcccgttcatgctcgcgcatccgctggaggcgctggagctcgacctcgccgactat
gccgccgagtggaaatgggacggcatccgcacccagctcgtccatgtcgccggcgagacc
cggctctacagccgcgccggcgacgacatcacccatagtttccccgaggtcgccgccgcc
ttccgcacgccgggcgtgctcgacggcgagctcctcgtgaagggcgagttccagggcggc
gaggcggcgagcttcaacgcgctccagcagcggctcgggcgcaaggcggtgtcggcgagg
acgctggccgaataccccgccttcgtccggctctacgacatcctgttcgacggacccgag
gacctgcgcgagctgccctggtcggagcggcgcgggcggctggagcggttcgcgggccgg
ctcgatcccgcgagcttcgacgtcagcccgctgatcgacgcgaccgacttcgcgcacctc
ggcgagatccgcgccggcgcgcgcgattcggcgatcgagggcgtgatgctgaagcgccgc
gattcgccctatgtcgccggccgccgcaccgggctctggtacaagtggaagcgcgatccg
ctcaccgccgactgcgtgatgatgtacgcccagcgcggcaacggccggcgctcgtccttc
tattccgactataccttcggctgctggagcaaggacggcgagctgctgccggtcggcaag
gcctattcgggcatcaccgacgaggaactgaagtggctcgaccgcttcgtgcgcaaccat
acggtgaaccgcttcgggccggtgcgcgaggtcgagaagacgctggtgctggaggtcgcg
ttcgattcgatccacctctcgaaacgccacaagtcgggcgtggcgatgcgcttcccccgc
atccaccgcatccgcgacgacaagcccgcggccgaggcggatacgctggaagcactgaaa
cggctggtgacgtag
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