KEGG   Sphingomonas cannabina: LZK98_03250
Entry
LZK98_03250       CDS       T08607                                 
Symbol
lptB
Name
(GenBank) LPS export ABC transporter ATP-binding protein
  KO
K06861  lipopolysaccharide export system ATP-binding protein [EC:7.5.2.5]
Organism
scab  Sphingomonas cannabina
Pathway
scab02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:scab00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    LZK98_03250 (lptB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:scab02000]
    LZK98_03250 (lptB)
Enzymes [BR:scab01000]
 7. Translocases
  7.5  Catalysing the translocation of carbohydrates and their derivatives
   7.5.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.5.2.5  ABC-type lipopolysaccharide transporter
     LZK98_03250 (lptB)
Transporters [BR:scab02000]
 ABC transporters, prokaryotic type
  ABC-2 type and other transporters
   Lipopolysaccharide transporter
    LZK98_03250 (lptB)
 Other transporters
  Pores ion channels [TC:1]
   LZK98_03250 (lptB)
SSDB
Motif
Pfam: ABC_tran AAA_21 BCA_ABC_TP_C DO-GTPase2 SbcC_Walker_B
Other DBs
NCBI-ProteinID: UIJ45984
LinkDB
Position
648409..649188
AA seq 259 aa
MNDVATLDRKGDVLPPEETSNGLSVISIAKAYDKRVVLSDVSLTVGHGEVIGLLGPNGAG
KTTCFYSVMGLVKPDSGRITLDGDDITGLPMYRRAILGLGYLPQETSIFRGLSVEKNILA
VLELSEPDKAMRQQRLDQLLDEFGLTRLRDAPAMALSGGERRRAEIARALAADPTIMLLD
EPFAGIDPISISDIRDLVKELKNRGIGVLITDHNVRETLDIVDRAYIIYDGRVLFTGSPE
ELVADANVRRLYLGEGFEL
NT seq 780 nt   +upstreamnt  +downstreamnt
atgaacgacgtcgccactctcgaccgcaagggagacgtgctcccgcccgaggagaccagc
aacggcctgtcggtgatctcgatcgccaaggcctatgacaagcgcgtggtgctgtcggac
gtgtcgctgacggtcggccacggcgaggtcatcggcctgctcggccccaacggtgccggc
aagaccacctgcttctattcggtgatggggctggtgaagcccgattcgggccgcatcacg
ctcgacggcgacgacatcaccggcctgccgatgtaccgccgcgcgatcctggggctcggc
tatctgccgcaggaaacctcgatcttccgcggcctctcggtcgagaagaacatcctcgcg
gtgctcgagctctccgagccggacaaggcgatgcgccagcagcggctcgaccagctgctc
gacgaattcggcctgacccggcttcgcgacgcgccggcgatggcgctgtcgggcggcgag
cgccgccgcgccgagatcgcccgcgcgctcgccgccgatcccaccatcatgctgctcgac
gagccgttcgccggcatcgacccgatctcgatctccgacatccgcgacctggtgaaggag
ctcaagaaccgcggtatcggcgtgctcatcaccgaccataatgtccgcgagacgctcgac
atcgtcgaccgggcctacatcatctacgacggccgggtgctcttcaccggctcgcccgag
gagctggtggcggacgccaatgtgcggcggctctacctcggcgaaggcttcgagctctga

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