Entry |
|
Name |
|
KO |
K10979 | DNA end-binding protein Ku |
|
Organism |
scab Sphingomonas cannabina
|
Brite |
KEGG Orthology (KO) [BR:scab00001]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LZK98_03365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:scab03400]
LZK98_03365
DNA repair and recombination proteins [BR:scab03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
LZK98_03365
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(675668..676552)
|
AA seq |
294 aa
MAARAYWQGQIRLALVSIPVEIYTATKSGAQISFHQVHEPSGKRIKYEKVVPGIGPVDPD
EIMKGYELEKGEYVLLDQDEIDAVKLESKKTLELTQFVDADEIDVLYYERPYFVVPADDL
AEEAFIVLREALRRARKVGLGQLAMRGREYVVSLKPCGRGMVLETLRYADEVNKAQGYFR
DIPDAEPDEDLLDLATTLIEKKTAKFDPKEFHDRYVDALKHLIERKVKSKGRKIIEEKEE
SRPTGHNVVDLMAALKKSLERPGPPASQGEKKAPARKPAARKPAARKAPARKRA |
NT seq |
885 nt +upstreamnt +downstreamnt
gtggcggcacgcgcctattggcagggacagatcaggctcgcgctcgtctcgattccggtc
gagatttacaccgcgaccaagtcgggggcgcagatcagcttccaccaggtccacgaaccc
tcgggcaagcggatcaagtacgagaaggtcgtgcccggcatcggtccggtcgaccccgac
gagatcatgaagggctatgagctggagaagggcgaatatgtcctgctcgaccaggacgag
atcgatgcggtcaaactcgaatcgaagaagacgctggagctcacccagttcgtcgacgcc
gacgagatcgacgtgctctattacgagcggccctatttcgtggtgcccgccgacgacctt
gccgaggaggcgttcatcgtgctgcgcgaggcgctgcgccgcgcgcgcaaggtcgggctc
ggccagctcgccatgcgcggccgcgaatatgtggtgagcctgaagccctgcggtcgcggc
atggtgctggagacgctgcgctacgccgacgaggtcaacaaggcgcagggctatttccgc
gatatcccggacgcggagccggacgaggacctgctcgacctcgccaccacgctgatcgag
aagaagacggcgaagttcgatcccaaggagttccacgaccgctacgtcgatgcgctgaag
cacctcatcgagcgcaaggtgaagtcgaagggtcgcaagatcatcgaggagaaggaggag
agccgcccgaccggccacaatgtcgtcgacctgatggcggcgctgaagaagagcctcgag
cggccgggcccgccggcgagccagggggagaagaaggctccggcgcgcaagcccgccgcc
cgcaaacccgccgcccggaaggcgccggcccgcaagcgcgcctga |