Sphingomonas cannabina: LZK98_04090
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Entry
LZK98_04090 CDS
T08607
Name
(GenBank) 3'-5' exonuclease
KO
K10857
exodeoxyribonuclease X [EC:3.1.11.-]
Organism
scab
Sphingomonas cannabina
Pathway
scab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LZK98_04090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
scab03400
]
LZK98_04090
DNA repair and recombination proteins [BR:
scab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LZK98_04090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
UIJ46139
LinkDB
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Position
complement(831137..831892)
Genome browser
AA seq
251 aa
AA seq
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MPSPSIIRVIDLETTGNAPPTHGVCEVGWQDVALGEDGRWELHGEGGSRLVNPGRPIPPV
TMAVHHIRDEDVADAPWWHDVARPILDPWPRRVALAAHRASFEEQFCTPALTHGAEWICT
WKCALRLWPDSPGFSNQLLRYWRRPQGLVHERGLPAHRAFPDAYVTAHHLRDMLNEASVA
QLIQWSNEPGLLPRVRYGPDRGKEWREIDNESLYAFLSDRDPDIRFTAETELARRRGGGE
IGPATAQELLL
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgccctccccgtccatcatccgcgtcatcgacctcgagactaccggcaacgcccctccc
acccatggcgtgtgcgaggtcggctggcaggacgtggcgctgggcgaggacgggcgctgg
gagcttcacggcgagggcggcagcaggctggtcaatcccggccggccgatccctcccgtc
accatggcggtgcatcacatccgcgacgaggacgtcgccgacgcgccctggtggcacgac
gtcgcccggccgatcctcgatccctggccgcgccgcgtcgcgctcgccgcgcaccgggcg
agcttcgaggagcagttctgcacgccggcgctgacgcatggcgccgaatggatctgcacc
tggaaatgcgcgctcaggctgtggccggattcgcccggcttctcgaaccagctgctccgc
tactggcggcggccccagggccttgtccacgagcgcggcctgcccgcacaccgtgccttc
cccgacgcctatgtcaccgcgcaccacctgcgcgacatgctgaacgaggcgtcggtcgcc
cagctcatccaatggtcgaacgagccgggcctgctgccgcgcgtccgctacggccccgac
cgcggcaaggaatggcgcgagatcgacaatgaatcgctctacgccttcctcagcgaccgc
gaccccgacatccgcttcaccgccgagaccgagctcgcccgccgccgcggcggcggcgag
atcggtccggcgaccgcgcaagagctgctgctgtag
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