Sphingomonas cannabina: LZK98_04995
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Entry
LZK98_04995 CDS
T08607
Symbol
cydD
Name
(GenBank) thiol reductant ABC exporter subunit CydD
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
scab
Sphingomonas cannabina
Pathway
scab02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
LZK98_04995 (cydD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scab02000
]
LZK98_04995 (cydD)
Transporters [BR:
scab02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
LZK98_04995 (cydD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_29
nSTAND1
AAA_22
AAA_16
RsgA_GTPase
AAA_33
Dynamin_N
AAA_25
Mg_chelatase
MMR_HSR1
Motif
Other DBs
NCBI-ProteinID:
UIJ46301
LinkDB
All DBs
Position
1002106..1003764
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AA seq
552 aa
AA seq
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MQTIALEPNSARVRRHRLRELTGRTLAGRSTILLVLDVYAAVGFAAGLAMAVPALAEGGS
AWPGVLLAIVAGVGRGACAMLAADAGADDARDLKLRLRSRMVDAILHLPPGGHRSTGELV
HAAVDEVEAIDGYVARFLPARHAAALGPAIVVIATAFVSPVAAAILMSTLLPFILALTLA
GGAAADESRRQFDALSRLSGLLGDRIRALPLVLAFRAEEAESRRLGAAASEVATRTLRVL
RIAFLSTGALEFFAALSVALVAVYAGFNLLGLLPFPVPERLGLGEAFFVLALAPEFYAPM
RRLAATYHDRQAAETAAERLAQVEIAGPPSAEMPILVDGPPSIAFSDVTIRHDGECQAAI
RGFSLAIGAGEAIALVGPSGSGKSSLLHLLLGLAPLTEGMILVNGEPLPPGASLASCTAW
AGQSPLILPGTIARNIALGAQGSSAGDIADAAAAAGLDGMLTRRAGGLDAVLDARGGGLS
GGERRRIGLARALLKRAPILLLDEPTAHLDLVGEEELIAVIAAAARSRTTILATHSRRLA
AIADRIIDLESR
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgatcgcacttgagccgaacagcgcgcgcgtccgccggcacaggttgcgggag
ctcaccggccggacattggccggccgctcgacgatcctgctggtgctggacgtctacgcg
gcggtcggcttcgctgccggactggcgatggcggtcccggctctggctgagggaggctca
gcctggcccggcgtgcttctcgccatcgttgccggcgtcggcaggggggcctgcgcgatg
ctcgcggccgatgccggcgcggacgatgcgcgtgatctcaagctgcggctgcgctcgcgg
atggtggatgcgatccttcatctgccgcctggaggccatcgcagcacgggcgagctggtt
catgccgccgtcgacgaggtggaagcgatcgacggctatgtcgcgcgtttccttcctgcc
cgccacgccgccgctctggggccggcgatcgtcgtgatcgccaccgcgttcgtcagtccc
gttgccgcggcgatcctgatgtccacgctgctgcccttcattctagccctcacgctggct
ggcggcgcggccgccgatgaatcgcgccggcagttcgatgcgctgtcgcggctgtcgggg
ctgctcggcgatcgcatccgggcattgccgctggtgctcgcctttcgggcagaggaggcg
gagagccggcggctgggcgccgccgcgagcgaagtcgcgacgcgcacgttgcgggtcctt
cgcatcgccttcctgtcgaccggcgcgctggagttctttgccgcgctgtcggtggcgctg
gttgcggtctatgccgggttcaacctactgggcctgctgccctttccggttcccgagcgg
ctcgggcttggcgaggccttcttcgtcctcgcgctggcgcccgagttctacgcgccgatg
cgtcggctcgccgccacctaccatgatcgccaggcagccgagacggcggccgagcgtctg
gcgcaggtcgagatcgccgggcccccaagtgccgaaatgccgatcctcgtcgacggcccg
ccatcgattgccttcagcgacgtgacgatccgccacgatggggagtgtcaggcggcgatc
cgcggattctccctggcgatcggtgccggcgaggcgatcgcgctggtcggcccgtcaggc
agtgggaagagcagcctgctccacctgttgctcgggcttgcaccgctcaccgaggggatg
atcctggtgaacggcgagccgctcccgcccggcgccagcttggcgtcgtgcaccgcctgg
gccggtcagtcgccgctcatcctcccgggcacgatcgcccgcaacatcgcgctgggggcg
cagggatcgagcgccggcgacatcgccgatgccgcagcggccgcggggctggacgggatg
ctgacgcgtcgcgccggcggcctcgatgcggtgctcgacgcccgcggcggcggactttcc
ggcggcgaacggcgccggatcggtctggcgcgcgccctgctcaagcgcgcgccgatcctg
cttctggacgaaccgacagcccatctcgatcttgtcggcgaggaggaattgatcgcggtc
atcgccgccgcggcgaggagccgcaccactatcctcgcgacgcacagccgccggctggcc
gcgatcgcggacaggatcatcgatttggagagtaggtga
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