Sphingomonas cannabina: LZK98_05060
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Entry
LZK98_05060 CDS
T08607
Name
(GenBank) PAS domain S-box protein
KO
K14986
two-component system, LuxR family, sensor kinase FixL [EC:
2.7.13.3
]
Organism
scab
Sphingomonas cannabina
Pathway
scab02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LZK98_05060
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
scab01001
]
LZK98_05060
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
scab02022
]
LZK98_05060
Enzymes [BR:
scab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
LZK98_05060
Protein kinases [BR:
scab01001
]
Histidine kinases
LuxR family [OT]
LZK98_05060
Two-component system [BR:
scab02022
]
LuxR family
FixL-FixJ (nitrogen fixation)
LZK98_05060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
PAS
PAS_9
HisKA
PAS_8
PAS_4
HATPase_c_3
HATPase_c_2
DUF4118
Diguanyl_cycl_sensor
Motif
Other DBs
NCBI-ProteinID:
UIJ46314
LinkDB
All DBs
Position
1015400..1016881
Genome browser
AA seq
493 aa
AA seq
DB search
MAVWPSPPLVVTLALAAAAIALGAGVRISFAEQLGPRATYIFFVPAVVAASALSGLRMGV
AASIAGAVVGLWCDRLIGPIEAGSLIAAAAFVVIGCAIALGGEWFQRARARAERVTAGLA
RREAHLRSILDTVPDAIVVIDEQGLIRDFSPAAERMFGWQANEVLDRNVSMLMPDPYRSA
HDGYLERYYRTGEKRIIGKGRVVVGERRDRSTFPIELAVGEMRADGQRYFTGFIRDLTER
QQAEARLQELQNELVHVSRLTALGEMASALAHELNQPLSAIANYLKGTRMLLERAEVPQE
RVADAVERAACEALRAGDIIRRLRDFVGRGEAERAVESLPKMVEEASALALIGAKEHGIR
VQYDFSPEIDLVLADKVQVQQVVLNLVRNAVDAMTESVSVRRELTITTELVDDEMAQVTV
ADSGPGIDPEVAEQLFQPFVTTKRAGMGIGLSISRTIIEAHGGRIWANARAGGGALFGFT
LPRVGEEELYDGG
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
ttggcagtctggccgtcgccgccgctggtcgtgacgctggcgctcgccgccgcggcgatc
gcgctcggcgccggcgtccggatcagcttcgcggagcagctcgggccgcgggcgacctat
atcttcttcgttccggctgtggtggcggcgagcgctctgtccggcttgcgcatgggcgtt
gctgcgagcatcgccggcgcggtggtcggtctgtggtgcgaccgcttgatcggcccgatc
gaggcgggaagcctgatcgcggccgcggccttcgtggtgatcggatgcgcgatcgcgctc
ggcggcgaatggttccagcgcgcccgcgcccgcgccgagcgcgtcaccgccggcctcgca
cgccgcgaagcgcacctgcgctcgatcctcgataccgtgccggatgcgatcgtggtgatc
gacgagcagggcttgatccgcgacttcagcccggccgccgagagaatgttcggctggcag
gcgaacgaggtcctcgaccgcaatgtcagcatgttgatgcccgatccctatcgctcggcg
catgatggttatctcgagcgctactaccggaccggcgagaaacggatcatcggcaagggc
cgggtcgtcgtcggggagcgcagggaccgctcgaccttcccgatcgagctcgccgtaggc
gagatgcgggccgacgggcagcggtacttcaccggcttcatccgcgaccttaccgagcgc
cagcaggcggaagcgcgactgcaggagctacagaacgagcttgtccatgtgtcgcgcctg
acggcgctcggcgagatggcctcggcgcttgcgcacgaactcaaccagccgctctcggcg
atcgccaactatctcaagggcacccgcatgctgctcgagcgcgccgaggtgccgcaggag
cgggtggccgacgcggtggagcgggcggcttgcgaagcgctgcgtgccggcgacatcatc
cggcgcctgcgcgacttcgtcggccgcggcgaggcggagcgtgcggtcgaaagcctgccg
aagatggtcgaggaggcgagcgcgctggcgctgatcggcgccaaggaacatggtatccgc
gtgcaatatgacttcagtcctgagatcgatctggtgctcgccgacaaggttcaggtccag
caggtcgtgctgaacctcgtgcgcaatgccgtcgacgcgatgaccgaatcggtgtcagtg
cgccgcgagctgacgatcaccaccgaactcgtcgacgacgagatggcgcaggtgaccgtt
gccgacagcggaccgggaatcgatccagaggtggccgagcagctgttccagcctttcgtc
accaccaagcgcgcgggtatgggcatcggtctgtcgatctcgcgcacgatcatcgaggcg
catggcgggcggatctgggcaaacgcgcgtgcgggcggcggggcattgttcggtttcacg
ctgccgcgcgtcggcgaggaggagctgtacgatggcgggtga
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