KEGG   Sphingomonas cannabina: LZK98_06080
Entry
LZK98_06080       CDS       T08607                                 
Symbol
sctC
Name
(GenBank) type III secretion system outer membrane ring subunit SctC
  KO
K03219  type III secretion protein C
Organism
scab  Sphingomonas cannabina
Pathway
scab03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:scab00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    LZK98_06080 (sctC)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:scab02044]
    LZK98_06080 (sctC)
Secretion system [BR:scab02044]
 Type III secretion system
  Type III secretion core apparatus
   LZK98_06080 (sctC)
SSDB
Motif
Pfam: Secretin Secretin_N Ig_TMEM131homol_6th T3S_SPI-1_N0
Other DBs
NCBI-ProteinID: UIJ46515
LinkDB
Position
complement(1245848..1247692)
AA seq 614 aa
MMRIPRRSLLLLASAVLASSTPALADTPPFPEKTVTLTARNQRVDAAIADLFGQAGLRVK
TSSAINGKINGVFVGTPRTIWAQLSRAFNLVAYYDGAVVRVYTGGEIQSKSFAAADPAAV
VQDAQRMRIVDGANSVAASTNAVSATGVPAFLDRVAQLAGSGAKPAMIPASATASSAGIV
SPLLNGPAPMGTVSAAPLRSRVLTAATARSPYEVRIFYLRYARADDTIQKSYDRTVVIPG
VASILRGMMGDGRPSNTVSTSGNFDIQRQSMPRLGGRGLNAVPPDESQRSFDQQGTPGFD
TVVIEKAEPRDVNGPRVEVDPTNNAVLVRDRPESMTVYEDIVKALDVEPRGVEIEATILE
LDTNRLKDLGLDFGLRTGGFAALFGGKQSNPTDNFSAPNFGATYLTGGLDLFAVRITALE
KAGVLSVVSRPRLSTLNNIPAVFNNQVQYYVRVAGDRQVDLFPVTAGMVMRINPSILYDG
GELRTRLAIEILDGSPSGMIVDGIPAVKQSSINTSAVVKQGESLLIGGMTVETNYDYKSK
VPGVGDIPIVGQAFRKRSKGTQHIERLFLITPRILSQRQTVAANGAAFQPTAETQPIPLE
QLQALGKGKRRAKR
NT seq 1845 nt   +upstreamnt  +downstreamnt
atgatgcgaatcccgcggcggtccctgctgcttctggcctcggccgtgctggcgtcgtcg
acgccggcgctggccgacacgcctcccttccccgagaagaccgtcaccctcaccgcgcgc
aaccagcgcgtcgatgccgccatcgccgacctgttcggccaggcgggcctcagggtgaag
accagctcggcgatcaacggcaagatcaacggcgtgttcgtcggcacgcccaggacgatc
tgggcgcagctgtcccgcgcattcaacctggtcgcctattacgacggcgcggtcgtccgc
gtgtacaccggcggcgagatccagtcgaagagcttcgccgccgccgatccggcggcagtg
gtgcaggacgcgcagcggatgcggatcgtcgacggggcgaactcggtcgcggcgagcacc
aacgcggtgagcgcgaccggcgtccccgccttcctcgaccgggtcgcgcagctggcggga
tcgggcgcgaagccggcgatgatccctgcctccgccaccgcctcgagcgcgggaatcgtg
tcgccgctgctgaacggtccggcgccgatgggcacggtctccgcggcgccgctgcgctcg
cgggtgctgacggccgccaccgcacgttcgccctatgaggtgcgcatcttctacctgcgc
tatgcccgcgccgatgacacgatccagaagagctacgaccgcaccgtcgtcatccccggc
gtcgcctcgatcctgcgcgggatgatgggggacgggcgtccttcgaacaccgtctcgacc
agcggcaacttcgacatccagcgccagtcgatgccgcggctcggcgggcgcgggctcaac
gcggtgccgcccgacgaatcgcagcgcagcttcgaccagcagggcacgcccggcttcgac
accgtcgtcatcgagaaggcggagccgcgcgacgtcaacggcccccgcgtcgaggtcgat
ccgaccaacaacgccgtgctggtccgcgaccgccccgaatcgatgaccgtctacgaggac
atcgtgaaagcgctcgacgtcgagccgcgcggcgtcgagatcgaggcgacgatcctcgag
ctcgacaccaaccggctcaaggacctggggctcgacttcggccttcgcaccggcggtttc
gcggcgttgttcgggggcaagcagtcgaatcccaccgacaatttctcggcccccaacttc
ggcgcgacctacctcacgggcgggctcgacctgttcgcggtgcgcatcaccgcgctggag
aaggccggcgtgctgagcgtggtctcccgcccgcgcctgtcgacgctcaacaacatcccc
gcggtgttcaacaaccaggtgcaatattacgtccgcgtcgccggcgaccggcaggtcgat
ctgttcccggtgaccgccggcatggtgatgcggatcaacccgtcgatcctctacgacggc
ggcgagctgcgcacgcggctggcgatcgagatcctcgacggctcgccgagcgggatgatc
gtcgacggcatccccgcggtgaagcagtcgagcatcaacaccagcgcggtggtcaagcag
ggcgagagcctgctgatcggcggcatgaccgtcgagaccaactacgactacaagtcgaag
gtgccgggcgtcggcgacatcccgatcgtcggccaggcgttccgcaagcgcagcaagggc
acgcagcatatcgagcggctgttcctgatcacgccgcgcatcctgtcgcagcgccagacg
gtcgccgcgaacggcgccgccttccagcccaccgccgagacccagccgatcccgctcgaa
cagctccaggcgctgggcaagggcaagcggagggccaaaaggtga

DBGET integrated database retrieval system