Sphingomonas cannabina: LZK98_06670
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Entry
LZK98_06670 CDS
T08607
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
scab
Sphingomonas cannabina
Pathway
scab03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LZK98_06670 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
scab03011
]
LZK98_06670 (rpsA)
Ribosome [BR:
scab03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LZK98_06670 (rpsA)
Bacteria
LZK98_06670 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
RRP4_S1
SH3_16
Motif
Other DBs
NCBI-ProteinID:
UIJ46625
LinkDB
All DBs
Position
complement(1374461..1376173)
Genome browser
AA seq
570 aa
AA seq
DB search
MATAANPTRDDFAALLDQTLGQADGFEGRVVIGTVTGIENDMAIIDVGLKSEGRVPLREF
AAPGQKAELKVGDEVEVFVDRVENANGEAMLSRDRARREAAWDKLEAEFAQGNRVDGVIF
GRVKGGFTVDLNGAVAFLPGSQVDIRPVRDVTPLMDIPQPFQILKMDRKRGNIVVSRRAV
LEETRAEQRSGLIQSLHEGQVIDGVVKNITDYGAFVDLGGIDGLLHVTDLSYKRVNHPSE
VLNIGDTVRVQIIRINRDTQRISLGMKQLESDPWDGAAQKYPVGAKLSGRVTNITEYGAF
VELEPGIEGLVHVSEMSWTKKNVHPGKIVSTSQEVEVVVLEVDEEKRRISLGLKQAQQNP
WEAFAAAHPVGSTVEGEVKNATEFGLFIGLDGDVDGMVHMSDIAWGISGEDALNLHRKGE
TVQAVVLAVEPDKERISLGMKQLERGGVPSPAAAGGARVNKNEIVTVTVLEVRDAGLEVQ
VGDDGATGFIKRTDLGRDRDEQRPERFQVGQKFDAMVTGFDRSKKPTFSVKAMQIAEEKQ
AVAQYGSSDSGASLGDILGEALKARNSETK
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgccgccaatcccacccgcgacgatttcgccgcgctgctcgaccagacgctc
ggccaggccgacggcttcgagggccgcgtggtcatcggtaccgtcaccggtatcgagaac
gacatggccatcatcgacgtcggcctgaagtcggagggccgcgtgccgctccgcgagttc
gccgcccccggccagaaggccgagctgaaggtcggcgacgaggtcgaggtgttcgtcgac
cgcgtcgagaacgccaatggcgaggcgatgctgagccgcgaccgcgcccgccgcgaggcc
gcgtgggacaagctggaggccgagttcgcccagggcaaccgcgtcgacggcgtgatcttc
ggccgcgtcaagggcggcttcaccgtcgacctcaacggcgcggtggccttcctccccggc
agccaggtcgacatccgcccagtgcgcgacgtcaccccgctgatggacatcccgcagccg
ttccagatcctcaagatggaccgcaagcgcggcaacatcgtcgtgtcgcgccgcgcggtg
ctggaagagacccgcgccgagcagcgttcgggcctgatccagagcctgcacgagggtcag
gtgatcgacggcgtcgtcaagaacatcaccgactacggcgcgttcgtggacctgggcggc
atcgacggcctgctccacgtcaccgacctcagctacaagcgcgtcaatcacccgagcgaa
gtgctcaacatcggtgacaccgtccgcgtccagatcatccgcatcaatcgcgacacgcag
cgcatcagcctcggcatgaagcagctggagagcgatccgtgggacggcgcggcgcagaag
tatccggtcggcgccaagctgtcgggccgcgtgaccaacatcaccgagtacggcgcgttc
gtcgagctggagcccggcatcgagggcctggtccacgtctccgagatgagctggaccaag
aagaacgtccatccgggcaagatcgtctcgacctcgcaggaggtggaagtggtcgtgctc
gaggtcgacgaggagaagcgccgcatcagcctgggcctcaagcaggcgcagcagaacccg
tgggaggcgttcgccgccgcgcacccggtcggctcgaccgtcgagggcgaggtcaagaac
gcgaccgagttcggcctgttcatcggcctggacggcgacgtcgacggcatggtccacatg
tccgacatcgcctggggcatctcgggcgaggacgcgctcaacctgcaccgcaagggcgag
accgtgcaggcggtcgtgctcgcggtcgagccggacaaggagcgcatcagcctcggcatg
aagcagctcgagcgcggcggcgtgccgagcccggcggccgccggcggtgcgcgcgtcaac
aagaacgagatcgtcaccgtgacggtgctcgaggtgcgtgacgcgggcctcgaggtccag
gtcggcgacgacggcgcgaccggcttcatcaagcgcaccgacctcggccgcgaccgcgac
gagcagcgcccggagcggttccaggtcgggcagaagttcgacgcgatggtcaccggtttc
gatcgctcgaagaagccgaccttctcggtcaaggcgatgcagatcgccgaggagaagcag
gcggtggcccagtatggttcgtcggattcgggtgcgtcgctcggcgacatcctcggcgag
gcattgaaggctcgcaacagcgaaaccaagtaa
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