Sphingomonas cannabina: LZK98_06985
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Entry
LZK98_06985 CDS
T08607
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scab03009
]
LZK98_06985 (der)
Ribosome biogenesis [BR:
scab03009
]
Prokaryotic type
GTPases
LZK98_06985 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
RsgA_GTPase
AIG1
Roc
Ras
MeaB
ABC_tran
AAA_24
GBP
TniB
Arf
Motif
Other DBs
NCBI-ProteinID:
UIJ46683
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All DBs
Position
1447396..1448763
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AA seq
455 aa
AA seq
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MPLPTVAIIGRPNVGKSTLFNRLVGKRLALVDDQPGVTRDRREGDATLLGLDFRVVDTAG
FEDEDAATLPGRMRVQTEAAVADADVALFMVDARAGIVPLDEEIARWLRSADTPVVLVAN
KAEGRAGESGVIEAMALGFGDPVQLSAEHGEGIADLFEALLPYIDREAEDEPEDDESPDA
PLKLAIVGRPNAGKSTLINRMLGQDRLITGPEAGITRDSIAIDWQWPDPVGGTRAVRLID
TAGMRKKARVQDKLEKLSVMDALRAVDFAEVVVLLLDATKGLEVQDLKIADRVLQEGRAL
VIALNKWDVAEDASKLFNGVKAALDEGLAQVKGVPLLTVSGATGKGIDTLLKVAFETREA
WSRRVSTGQLNRWFERAIEANPPPAPGGKRIKARYVTQVKTRPPSFVLFGTRVDLLPESY
RRYLVNGLRREFDFGAVPVRLTLRAPKNPFDRDRE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgccactccccaccgtcgccatcatcggccgccccaacgtcggcaagtcgacgctgttc
aaccggctcgtcggcaagcgcctggcgctggttgacgaccagccgggcgtgacccgcgac
cgccgcgagggcgacgcgaccctgctcgggctcgatttccgcgtcgtcgacaccgccggc
ttcgaggatgaggatgccgcgaccctgccgggccggatgcgcgtgcagaccgaggctgcc
gtagcggacgccgatgtcgcgctgttcatggtcgatgcccgtgccggcatcgttccgctg
gacgaagagatcgcccgctggctgcgcagcgcggatacgccggtggtgctggtcgccaac
aaggcggagggccgcgccggcgaaagcggcgtgatcgaggcgatggcgctcggcttcggc
gatccggtgcagctttccgccgagcatggcgagggcatcgccgacctgttcgaggcgttg
ctgccctatatcgaccgtgaagccgaggacgagccggaggacgacgagagccccgatgca
ccgctcaagctcgcgatcgtcggtcgccccaatgccggcaagtcgacgctgatcaaccgg
atgctcgggcaggaccggctgatcaccggtccggaagccggcatcacccgcgattcgatc
gcgatcgactggcaatggccggatcccgtcggcggcacgcgtgccgtccgcctgatcgac
accgccgggatgcgcaagaaggcgcgggtgcaggacaagctcgagaagctgtcggtgatg
gacgcgctgcgcgcggtcgatttcgccgaggtggtggtgctgctgctcgacgcgaccaag
gggctcgaggtccaggacctcaagatcgccgaccgcgtgctgcaggaagggcgtgcgctg
gtcatcgcgctcaacaaatgggacgtcgccgaggacgcctccaagctgttcaacggcgtc
aaggccgcgctcgacgaggggctggcgcaggtgaagggcgtgccgctgctcaccgtctcc
ggcgcgacggggaaggggatcgacactttgctcaaggttgcgttcgagacgcgtgaggcc
tggtcgcggcgcgtgtcgaccggccagctcaaccgctggttcgagcgcgcgatcgaggcc
aacccgccccccgcgcccggcggcaagcggatcaaggcgcgctacgtgacccaggtgaag
acgcggcctcccagcttcgtgctgttcggcacccgcgtcgacctgctgcccgaaagctac
cgccgctatctggtcaacggcctgcgccgcgagttcgatttcggcgcggtgccggtgcgg
ctcacgctgcgcgcaccgaagaaccccttcgaccgggaccgcgaatga
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