Sphingomonas cannabina: LZK98_08515
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Entry
LZK98_08515 CDS
T08607
Name
(GenBank) DeoR/GlpR family DNA-binding transcription regulator
KO
K02081
DeoR family transcriptional regulator, aga operon transcriptional repressor
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
scab03000
]
LZK98_08515
Transcription factors [BR:
scab03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
LZK98_08515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_PafC
GntR
FeoC
HTH_20
Motif
Other DBs
NCBI-ProteinID:
UIJ46969
LinkDB
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Position
1758144..1758923
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AA seq
259 aa
AA seq
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MSVTRDTSERRQQISALVRERGSVQVAPLAARFGVSVQTIRKDLHFLEKRGVAERSYGGA
ISADAVNVAVEPSVETKRAIHIDEKARIGALAASMVKPGDSIVLDSGTTALQIAHHLPDD
EDITVLTNDLDIVCALARKERITVVMLGGTLRRRNRAFYGAQTVGALDDLHVDKLFLGVD
GFDLERGITTHFEPEAMLNRKMVQAARQVIAVTDRSKFGRVCLHRILNVGEIDDLVTDAT
EADGMHAAADRLGFRLHIV
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcacccgggacaccagcgagagacgtcagcagatcagcgcgctcgtgcgcgag
cgggggagcgtgcaggtggcgccgctggcggcgcggttcggggtatcggtgcagacgatc
cgcaaggacctgcatttcctggagaagcgcggcgtcgccgagcggtcctacggcggtgcg
atctccgccgatgcggtgaacgtcgcggtcgagccctccgtcgagaccaagcgggcgatc
cacatcgacgagaaggcgcggatcggggcgctggcggcgtcgatggtgaagccgggcgat
tcgatcgtgctcgattcgggcacgaccgcgctgcagatcgcgcaccacctgccggacgac
gaggatatcaccgtcctgaccaacgatctcgacatcgtgtgcgcgctcgcgcgcaaggag
cggatcacggtggtgatgctgggcggcacgctgcgccgtcgcaaccgtgccttctatggc
gcgcagacggtgggcgcgctcgacgacctccatgtagacaagctgttcctgggcgtggac
ggcttcgatctcgaacgcggcatcaccacccatttcgagcccgaggcgatgctgaaccgc
aagatggtgcaggccgcgcggcaggtgatcgcggtgaccgaccgctcgaagttcggccgc
gtctgcctccaccgcatcctcaacgtcggcgagatcgacgatctcgtcaccgacgcgacc
gaggccgacgggatgcacgccgccgccgaccggctcgggttccggctgcacatcgtctga
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