Sphingomonas cannabina: LZK98_08625
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Entry
LZK98_08625 CDS
T08607
Name
(GenBank) penicillin-binding protein 2
Organism
scab
Sphingomonas cannabina
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
UIJ46990
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Position
1792635..1794344
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AA seq
569 aa
AA seq
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MIVLVAPAAAERRREGGRHSLVAVAHLRLTILMLLFVFSTILIVGRLGWLALSAEPATTR
DAAAALVPLRGDIVDRNGASLARTIDAWSIGVQPGNIIGDKVELAQKLAALMPERDPSYY
YRLLTLKAPFTYIRHRAMPELVTAVNALGEPGITFAREPERLYPQSALAAQALGYLNAER
RGVRGMEKALDARLTNRALRSQPVALSLDLRVQGALESELGRAMTSFQAKGAAGIVLDVH
TGEVIAMSSLPTFNPNKVRSGEGTLLNNVTQSVYELGSAFKPIAIAAAIDTGTVTSMARK
FDATQPLQVGRFKIKDDHAQKRWLNIPETLIHSSNIATARIADEMGQEKLSAMFRKVGFD
TAPDIEIEKAHPLWPRFWARTTVMTTAYGHGIAVTPLHLASAYAALVNGGIWRPATLLKV
EPGHAPEGRRVISEATSARMRQLLRLIVLDGTGRKGEAPGYRVGGKTGTAEKPGAGGYSK
HVNVSTFAAAFPMDAPRYVVIAMLDSPIGNAESFGLTTAAYTAAPVVSRLITRAGPLLGV
QPDMNRDVDVSDLEPLIWHKPGEDPGLAE
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
ttgatcgtcctcgtcgctcctgctgcggccgagcgccgccgggagggcggccggcattcg
ctggtcgcggtggcgcatctgcgcctgacgatcctgatgctgctgttcgtcttctcgacg
atcctgatcgtcggccggctcggctggctggcgctgtcggcggagcccgcgaccacgcgt
gacgccgccgcggcgctggtgccgctgcgcggcgacatcgtcgaccgcaacggcgcgtcg
ctcgcgcgcaccatcgacgcctggtcgatcggggtgcagcccggcaacatcatcggcgac
aaggtcgagctggcgcagaagctcgccgcgttgatgccggagcgcgatccgtcctattac
taccgcctgctcacgctgaaggcgcccttcacctacatccgccaccgcgcgatgcccgag
ctggtgaccgcggtgaacgcgctcggcgagcccggtatcaccttcgcgcgcgagccggag
cggctctatccgcaatcggcgctggcggcgcaggcgctcggctatctcaacgccgagcgg
cgcggcgtgcgcggcatggagaaggcgctcgacgcgcggctcaccaaccgcgcgctgcgg
tcgcagccggtcgcgctgtcgctcgacctgcgcgtgcagggcgcgctcgaaagcgagctc
ggccgggcaatgacctcgttccaggccaagggcgcggccggcatcgtcctcgacgtccac
accggcgaggtcatcgccatgtcgtcgctgccgaccttcaacccgaacaaggtccgcagc
ggggagggcacgctgctcaacaacgtgacgcagagcgtctacgagctcggctcggcgttc
aagccgatcgcgatcgccgctgcgatcgacaccggcaccgtcacctcgatggcgcgcaag
ttcgacgcgacccagccgctccaggtcggccgcttcaagatcaaggacgatcacgcgcag
aagcgctggctcaacatccccgagacgctgatccactcgtccaacatcgcgacggcgcgc
atcgccgacgagatggggcaggagaagctgtcggcgatgttccgcaaggtcggcttcgac
accgcgccggacatcgagatcgagaaggcgcatccgctgtggccgcgcttctgggcgcgc
accacggtgatgaccactgcctacggccatggcatcgcggtgacgccgctccacctcgcc
agcgcctatgccgcgctggtcaacggcggcatctggcggccggcgacgctgctcaaggtc
gagccgggccatgctcccgagggccgccgcgtcatctcggaggcgaccagcgcgcggatg
cgccagctgctccgcctgatcgtgctcgacggcaccggccgcaagggcgaggcgcccggc
taccgcgtcggcggcaagaccggcaccgcggagaagccaggagcgggcggctattcgaaa
catgtcaacgtttcgacgttcgcggcggctttcccgatggacgcaccgcgctatgtggtg
atcgcaatgctcgattcgcccatcggcaatgccgaatcctttggcctgaccaccgccgcc
tacaccgctgcgccggtggtgagccgtctcatcacgcgcgcggggccgctgctcggcgtg
cagcccgacatgaaccgcgacgtcgacgtgtcggacctggagccgctgatctggcacaag
cccggcgaggacccggggctggccgagtga
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