Sphingomonas cannabina: LZK98_08645
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Entry
LZK98_08645 CDS
T08607
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00470
D-Amino acid metabolism
scab00550
Peptidoglycan biosynthesis
scab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LZK98_08645 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LZK98_08645 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
scab01011
]
LZK98_08645 (murD)
Enzymes [BR:
scab01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
LZK98_08645 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
scab01011
]
Precursor biosynthesis
Amino acid ligase
LZK98_08645 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
adh_short
Motif
Other DBs
NCBI-ProteinID:
UIJ46994
LinkDB
All DBs
Position
1798450..1799784
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AA seq
444 aa
AA seq
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MITSPSWRGRRYAVLGLARSGAATVRALVASGAKVVGWDSNQDTARGLVGQLKSDREQYE
AEPGFILKNWELALDLTGFEAVVVSPGVPLNRHPVAEKAARYGLPLIGDIELFAEARPSL
PPHRVVGITGTNGKSTTTALIHHICETAGLPARLGGNIGLPILGQDPLPEGGVYVLELSS
YQIDLTHSLDCDVAVLLNITPDHLDRYDGFEAYAAAKARLFAMQSPGHAAVIGIGDEPSA
AIARQVSRAGRAEDLTKIAPGVCMDQSRWPALQGPHNAQNALAAIAACDALGIPNAAIDK
GLETFPGLPHRMERIAVRHGVAYVNDSKATNPTSTAPALAAFERIHWILGGQAKTDDLDA
CAPYFGHVARAYTIGEAGPMFARLLAPHMPVEESGTLAAAVAQAAAWAGEGETVLLSPAC
ASFDQFKDYEDRGRAFRAAVEALA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccagcccgtcctggcgcggcagacgctatgcggtgctggggctggcgcgctcg
ggcgctgcgacggttcgcgctctggtggcgagcggagccaaggtggtcggatgggactcg
aaccaagacactgcgcgcggtctcgtcggacaactgaaatctgatcgtgagcaatatgag
gccgagccaggcttcatcttgaagaattgggagctcgctctcgacctgacggggttcgaa
gccgttgtcgtctcgccaggcgtgccgctcaatcggcatccggttgccgagaaggctgcg
cgctatggtctcccgctgatcggcgacatcgagctgttcgccgaagcgcgcccgtcgctg
ccgccgcacagggtcgtcggcatcaccggcaccaacggcaagtcgaccaccactgcgctc
atccaccacatctgcgagaccgccggcctcccggcgcggctcggcggcaatatcggcctg
ccgatcctggggcaggacccgctgcccgagggcggcgtctacgtcctcgagctgtcgagc
taccagatcgacctcacccacagcctcgactgcgatgtcgcggtgctgctcaacatcacc
cccgaccatctcgaccgttacgacggcttcgaagcctacgccgccgccaaggcgcggttg
ttcgcgatgcagtcgcctggccatgccgcggtgatcggcatcggcgacgagccctccgcc
gccatcgcccgccaggtctcgcgcgccggccgcgccgaggacctgaccaagatcgccccc
ggcgtctgtatggaccagtcgcgctggccggcgctccagggaccgcacaatgcccagaac
gcgctcgccgcgattgccgcctgcgacgcgctcggcatccccaacgcagcgatcgacaag
gggctggagaccttccccggcctgccgcatcgcatggagcggatcgcggtccggcacggc
gtcgcctacgtcaacgatagcaaggcgaccaaccccacttcgaccgcgcccgcgctcgcc
gccttcgaacgcatccactggattctcggcggccaggccaagaccgacgatctcgacgcc
tgcgcgccctacttcggccatgtcgcgcgcgcctatacgatcggcgaggcggggccgatg
ttcgcccgcctgctcgccccccacatgccggtcgaggaaagcggcacgctcgccgccgcc
gtggcccaggccgccgcgtgggccggggagggggagacggtgctgctctccccagcctgc
gcctcgttcgaccagttcaaggactatgaggaccgcggccgcgcctttcgcgccgcggtg
gaggcgctggcatga
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