Sphingomonas cannabina: LZK98_08900
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Entry
LZK98_08900 CDS
T08607
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scab02000
]
LZK98_08900
Transporters [BR:
scab02000
]
Other transporters
Pores ion channels [TC:
1
]
LZK98_08900
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
UIJ47043
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All DBs
Position
complement(1848149..1850578)
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AA seq
809 aa
AA seq
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MIHSRTALALTASIIALAGQAAHAQQTTPAESAPAPQAGPEEAQSPAAGDIVVTGTRVAG
RSKLDTASPVDVLSANSLRQQGTTELGASLATVAPSIDFPRPSAVDGTDAIRPATLRGLS
PDQTLVLVNGVRSHTAALLNINGSVGRGSAATDLNTIPTVALDRIEVLRDGASAQYGSDA
IAGVVNVRLREARSGGGVSATYGFYDTDIDTARGHRSVTGEHTLSVSGWQGVGFGEDGFL
TVSGEYLERQPTNRADYDPRVTPNRVTGRFGDPQVRQYSIWANAGTTIAGDWKLYGWFGY
QDRDTRSAAFPRLPSASGAFVPTLYPNGFLPLINTKSTDVNSAIGVKGSLGDWNVDVNVS
YGRNKIGFRTLNSANYSYGDASQTDFSDGALIYDQLVGGIDVTREFPVFRSLNVAFGIEG
RREGFKITPGEPASYNSGPAFPLAQPGAQGFVGFSPINAIEKHRQNGSIYLDLEAQVTDK
LLIGLAGRGEDYSDFGTTATGKVSIRYDFAPWFALRGTASTGFRAPALQQQYFTSVASVI
QNGAPLLTGLYPSTSPVGAALGGLPLEPEKSTNFSVGTVIRSGGFDLTVDGYYIKIRDQI
GLSENIQASFSPEVAAILAPFGVQAARFFINGLASTTQGIDVVAHYRLRSAGAGTFDFTV
AGNVNTIDVTRVPTSTAVLDPAPTLFARSRILTLEQGTPGEKVTGSLDWSLDRIGATARV
TYYGNVNQPGTAADGSADIFTGRHVITDLELRYQAAKGAQIALGVSNLFDVYPDATAAAL
NSTGVVGFPYYSPFGFNGRYLYARAGLNW
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgattcactcgcgtaccgcgctcgcgctcaccgcctccatcatcgcgctggccggccag
gccgctcatgcgcagcagacgacgccggcggaaagcgcgcctgcgccacaggccggtccg
gaagaggcccagtcgcccgcagcgggagacatcgtcgtcaccggcacccgcgtcgcgggg
cgctccaagctcgacacggcatcgcccgtcgacgtgctgagcgcgaacagcctgcgccag
cagggcacgaccgagctcggtgcctcgctggcgacggtggcgccttcgatcgacttcccg
cgcccttcggccgtcgacggcaccgacgcgatccggcccgccacgctgcgcggcctttcg
cccgaccagacgctggtcctcgtcaacggcgtgcgttcgcacaccgcagcgctgctcaac
atcaacggctccgtcggccgcggttcggcggcgaccgacctcaacaccatcccgacggtc
gcgctcgacaggatcgaggtgcttcgcgacggcgcatcggcgcaatatggctccgacgcc
atcgccggtgtggtcaacgtccggctgcgggaggcccgctcgggcggcggcgtttccgcg
acctatggcttctacgacactgacatcgacactgcccgcggccaccggtcggtgactggc
gagcacacgctgagcgtctcgggctggcagggcgtcggcttcggcgaggacggcttcctg
accgtgtccggcgagtatctcgagcgccagccgaccaaccgcgccgactatgatccgcgc
gtcacgccgaaccgggtcaccggccgcttcggcgatccgcaggtgcgtcagtacagcatc
tgggccaacgccggcaccaccatcgccggcgactggaagctctacggctggttcggctat
caggaccgtgacacgcgcagcgccgccttcccgcgcctgccgagcgcgtcgggagccttc
gtgccgacgctctatcccaacggctttctgccgctcatcaacaccaagtcgaccgacgtg
aactcggcgatcggcgtcaagggcagcctcggcgactggaacgtcgacgtgaacgtcagc
tacggccgcaacaagatcggcttccgcacgctcaattcggcgaactacagctatggcgat
gcctcgcagaccgatttctcggacggggcgctgatctacgaccagctcgtcggcgggatc
gacgtgacgcgcgagttcccggtgttccggtcgctcaacgtcgccttcggcatcgaaggg
cggcgcgaaggcttcaagatcacgccgggcgagccggcatcctataattcagggccggcc
ttcccgctcgcgcagccgggtgcgcagggcttcgtcggcttctcgccgatcaatgcgatc
gagaagcaccggcagaacggatcgatctacctcgacctcgaggcgcaggtcaccgacaag
ctgctgatcggtctcgctggccgcggcgaggattattccgacttcggcaccactgcgacc
ggcaaggtctcgatccgctacgacttcgctccatggttcgcgctgcgcggcacggcctcg
accggcttccgcgcgccggcgctgcagcagcagtatttcacctcggtcgcctcggtgatc
cagaacggggcgccgctgctgaccgggctctatccctcgacctcgcccgtgggcgcggcg
ctgggcgggctgccgctcgagcccgagaagtcgaccaacttctccgtcggcacggtgatc
cgcagcggcggcttcgacctcaccgtcgacggctattacatcaagatccgcgaccagatc
ggcctgtcggagaacatccaggccagcttcagccctgaagtcgcggcgatcctcgcgccg
ttcggcgtgcaggcggcgcgcttcttcatcaacggtctcgcctcgaccacgcagggcatc
gacgtggtggcgcactaccggctgcgctcggcgggcgccggcaccttcgacttcaccgtc
gcgggcaacgtcaacacaatcgacgtgacccgcgtgccgacctcgaccgcggtgctcgac
cccgccccgaccctgttcgcccgcagccgcatcctgacgctggaacagggcacgccgggc
gagaaggtgacgggatcgctcgactggtcgctcgaccggatcggcgcgacggcgcgcgtg
acctattacggcaacgtcaaccagccgggcacggcggccgacggttcggccgacatcttc
accgggcggcacgtcatcaccgacctcgagctacgctaccaggcagccaagggcgcccag
atcgcgctcggcgtcagcaacctgttcgacgtctatcccgatgcgaccgccgccgcgctc
aactcgaccggcgtggtcggctttccctattattcgccgttcgggttcaacgggcgctat
ctctatgcccgcgccggcctgaactggtga
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