Sphingomonas cannabina: LZK98_09000
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Entry
LZK98_09000 CDS
T08607
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
LZK98_09000 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
scab01007
]
LZK98_09000 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scab03016
]
LZK98_09000 (serS)
Enzymes [BR:
scab01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
LZK98_09000 (serS)
Amino acid related enzymes [BR:
scab01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
LZK98_09000 (serS)
Transfer RNA biogenesis [BR:
scab03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
LZK98_09000 (serS)
Prokaryotic type
LZK98_09000 (serS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
ALC
Motif
Other DBs
NCBI-ProteinID:
UIJ47061
LinkDB
All DBs
Position
complement(1865394..1866674)
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AA seq
426 aa
AA seq
DB search
MHDIRLIRDDPAAFDAALARRGLEPQAAGLAALDERRRALITEIQAGQARRNEASKAIGA
AKAQKDEATAQALMAEVAALKERLPALEDEEQQVGHELTTRLASIPNLPLPDVPEGADEN
DNALEKTVGEPPAFAFEAKEHDALGPALGLDFETGVALAGARFTLLRGPAARLHRALGQF
MLDTLTRGHGYEEVVPPLLVRDEAVYGTGQLPKFAEDLFRTTDGRWLIPTAEVSLTNIVR
EQILPEEELPLRFAALTPCFRSEAGAAGRDTRGYIRQHQFEKAEMVSITTPEQSEAEHER
MTAAAEDILTRLGLPFRRMKLCTGDMGFSAARTYDLEVWLPGQARYREISSCSTCTDFQA
RRMNARCRPAGEKATRFVHTLNGSGLAVGRTLVAVIENYQQQDGAVAVPEALQPYLRGLN
RLEPGA
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacatccgcctgatccgcgatgaccccgccgccttcgacgccgcgctcgcccgg
cgcgggctggagccccaggctgccggcctcgccgcgctcgacgaacgccgccgcgcgctg
atcaccgagatccaggcgggccaggcacgccgcaacgaagcctccaaggcgatcggcgcg
gccaaggcgcagaaggacgaagcgacggcgcaggcgctgatggcggaggtagcggccctc
aaggagcggctgcccgcgctcgaagacgaggagcagcaggtcgggcacgagctcactacc
cgcctcgcctcgatccccaacctgccgttgcccgacgtgcccgaaggcgccgacgagaac
gacaatgcgctggagaagacggtcggcgaaccgccggccttcgccttcgaggcgaaagag
catgatgcgctcggccctgcgctcgggctcgacttcgagacgggcgtggcgctcgccggc
gcgcgattcacgctgctgcgcgggcccgctgccaggctccaccgcgcgctcggccagttc
atgctcgacacgctgacgcgcgggcacggctatgaggaggtcgtgccgccgctgctggtg
cgcgacgaggcggtctacggcaccggccagctccccaaattcgccgaggacctgttcaga
accaccgacggtcgctggctgatcccgaccgccgaggtaagcctgaccaacatcgtccgc
gagcagatccttcccgaggaggagctgccgctgcgcttcgccgcactcaccccctgcttc
cgctcggaggcgggcgccgccgggcgcgacacgcgcggctatatccggcagcatcagttc
gagaaggcggagatggtctccatcaccacccccgaacagtccgaggcggagcatgagcgc
atgaccgccgccgccgaggacatattgacccggctcggcctccccttccgccgcatgaag
ctgtgcaccggcgacatgggcttctcggcggcgcgcacctacgatctcgaagtgtggttg
cccggccaggcgcgctatcgcgagatctcgagctgctcgacctgcaccgacttccaggcg
cgccgcatgaatgcgcgctgccggccggccggcgagaaggcgacgcgcttcgtccatacg
ctcaacggctcgggactggcggtcgggcgcacgctggtcgcggtgatcgagaactatcag
cagcaggacggcgcggtcgcggtgccggaggcgctccaaccgtatctgcgcggcctcaac
cggctcgaaccgggcgcctga
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