Sphingomonas cannabina: LZK98_09820
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Entry
LZK98_09820 CDS
T08607
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
scab02000
]
LZK98_09820
Transporters [BR:
scab02000
]
Other transporters
Pores ion channels [TC:
1
]
LZK98_09820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
OMP_b-brl_3
Plug
Motif
Other DBs
NCBI-ProteinID:
UIJ47210
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All DBs
Position
2072222..2075020
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AA seq
932 aa
AA seq
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MRLREMTLLSTSLAGILGFAGSAQAQQAPATQSDTTPTQETAPQPAGQGADADQSDIVVT
GLRGSLREALEIKRNANAVVDAISSEDIGKFPDRNVAESLSHIPGVSIDRRFGEGEKVAI
LGTDPALNRMLLDGHGLASADWGGNDNDPSSRTFNYSLLAPELVDRLEVYKSPEARIEEG
SLGGTVIVRTRRPLELKANSIFASGGYSYNDRAEKGSFRGSGLYSWKNEAETFGVLVAAT
YDKQNLVRSGVEFFGYDNADGSGSPFMTTNAAGERVLKNPNAVITGGTLADLDKAASPFG
INYAYFQQKRERASIAGTVQLRPAEKLTLTLSGLHIDGNYNNYSQSMYTIPGAWTGDVLQ
SATISNGVVTDASFGASNGASAQLDTLVRRTKLKTDNVNFFADWEGDDGSKLSFAAGWSK
AKGGRNPEYLFNVQTAAPFSYSISPTSAEVNFGGDITNPASYFTNPNNNPATIEGNPVIV
NGAPLVAAQIGGLDYSVTTDKDAFAGFDGTVPLGGFFTQLLIGARFTDHVNRVDARGVNT
YLQQSLLGSELGVDALVTPDDVFSGTGGSGNATRYLNLPEQSVIDVLANAINSPLVDKIG
ASTRVKERVAASYVQLNFEQGGLRGNVGGRLVYTKNVSYYALTLPTPADPNPRPVPTSTS
TDYLKFLPALNVAYEVNPKLIFRGAVAKVISRPRYQDLAASITQNDVTYDAGGGNPFLKP
YESTNFEVTAEYYPAPGALLSLELYRREISNYIITTRQEGVTLYNSLTGQLESRYSVSRP
VNGGKAKVNGILINGQAELWGGFGIQANYAYQDSSTSTTLDTTEILNLPYLSKHTVNIIP
YFEKGPFQARVSYNYRSSYFRTIGRLGSQEMVAPYHQLDASAALKLNDNVTLTVQAQNLL
DEKYLQYSGTRDRPSAFYKNGRTFVGSISFRM
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgcgagagatgaccctgctgtccacatccctggccggcatcctcggctttgcc
ggcagcgcccaggcgcagcaggcgcctgccacgcaatccgacacgacacccacgcaggaa
acggcgccccaaccggcgggtcagggtgccgatgccgatcagtcggatatcgtcgtcacc
ggcctccgcggcagccttcgcgaggcccttgagatcaagcgcaacgcgaacgcggtggtg
gacgcgatctcgtcggaggacatcggcaagttccccgatcgcaacgtcgccgaatcgctg
tcgcacattcccggcgtctcgatcgaccgccgtttcggcgagggcgagaaggtcgcgatt
ctcggcaccgatccggcgctgaaccggatgctgctcgacggccacggcctggcctcggcc
gattggggcggcaacgacaacgatcccagcagccgcaccttcaactattcgctgctcgcg
cccgagctggtcgaccggctggaggtctacaagtcgcccgaggcgcgcatcgaggaaggc
agcctcggcggcacggtgatcgtccgcactcgccggccgctcgagctcaaggccaattcg
atcttcgcgtccggcggctattcgtacaacgaccgggcggagaaagggagcttccgcggc
tccggcctctacagctggaagaacgaggcggagacgttcggcgtcctggtcgccgccacc
tacgacaagcagaatctcgtgcgctcgggcgtcgagttcttcggctacgacaatgccgac
ggttccggcagccccttcatgacgaccaacgccgcgggcgagcgcgtgctcaagaatccc
aatgcggtgatcaccggcggcacgctcgccgatctcgacaaggccgcgtcgccgttcggc
atcaactatgcctatttccagcagaagcgtgagcgcgccagcatcgcgggcaccgtgcag
ctgcgcccggcggagaagctgaccctcacgctgagcggcctgcacatcgacggcaactac
aacaactacagccagtcgatgtacacgatccccggcgcctggacgggcgacgtactgcag
tcggcgaccatctcgaacggcgtggtgacggacgccagcttcggggcctccaacggggcg
agcgcgcagctcgacacgctcgtccgccgcacgaagctcaagacggacaacgtcaacttc
tttgccgactgggaaggcgatgatggctcgaagctgtccttcgccgccgggtggagcaag
gcgaagggcgggcggaaccccgaatatctcttcaacgtccagaccgcggcgccgttcagc
tactcgatcagcccgacgtcggccgaggtgaacttcggcggcgacatcaccaatccggcc
agctatttcaccaatcccaacaacaaccccgcgacgatcgagggcaacccggtgatcgtc
aacggcgcgccgctcgtcgccgcgcagatcggcggtctcgactacagcgtcaccaccgac
aaggacgcgttcgccggcttcgacgggaccgtgcccctcggcggcttcttcacccagctg
cttatcggcgcccgcttcaccgaccacgtcaaccgggtcgatgcgcgcggcgtgaacacc
tatctccagcaatcgctgctcggctcggagctgggcgtggacgcgctcgtcacccccgac
gacgtattcagcgggacgggaggcagcggcaatgcgacgcgatacctgaacctgcccgag
cagtcggtcatcgacgtcctcgccaacgcgatcaactcgccgctggtggacaagatcggc
gcctccacccgcgtgaaggagcgggtcgcggcgagctacgtccagctcaacttcgagcag
ggcgggctgcgcggcaacgtcggcggacggctcgtctataccaagaacgtgtcatactat
gccctgacgctgccgacgccggccgatcccaatccgcgcccggtgccgaccagcacctcg
accgactatctgaaattcctgccggcgctcaacgtcgcctatgaggtcaatccgaagctg
atcttccgcggcgcggtggccaaggtgatctcgcggccgcgctaccaggacctggcggcc
tcgatcacgcagaacgatgtcacttatgatgccggcggcggcaatcccttcctcaagccc
tatgaatcgaccaacttcgaggtcacggcggaatattatccggcgcccggcgcgctgctg
tcgctcgaactctatcggcgcgaaatctccaactacatcatcaccacgcgccaggagggc
gtgacgctctacaactcgctgacgggccagctcgagagccgttatagcgtgtcgcggccg
gtcaacggcggcaaggcgaaggtgaacggcatcctgatcaacgggcaggcggagctctgg
ggcgggttcggcatccaggccaactatgcctatcaggacagcagcacctcgacgacgctg
gacacgaccgagatcctcaacctgccgtatctctccaagcacacggtcaacatcatcccc
tatttcgagaaggggcccttccaggcgcgcgtgagctacaattatcgctcatcctatttc
cggacgatcggccgcctcggctcgcaggagatggtggcgccctatcatcagctcgacgcc
tcggccgcgctcaagctgaacgacaacgtcacgctgaccgtccaggcgcagaacctgctc
gacgagaagtatctgcaatacagcggcacgcgcgaccgaccatcggccttctacaagaac
gggcggaccttcgtcggcagcatctccttccggatgtag
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