Sphingomonas cannabina: LZK98_10250
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Entry
LZK98_10250 CDS
T08607
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
scab03009
]
LZK98_10250
Enzymes [BR:
scab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
LZK98_10250
Ribosome biogenesis [BR:
scab03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LZK98_10250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UIJ47286
LinkDB
All DBs
Position
complement(2162501..2163565)
Genome browser
AA seq
354 aa
AA seq
DB search
MARTTGKDTQRIAKLLARAGVASRREIERMIGEGRIALNGVAVETPATLLPSLRGVTVDG
QPVKEPTPARLFLFHKPVGLLTAARDPRGRPTIYDRLPKGLPRLMPVGRLDLNTEGLLLL
TTDGELKRQLELPSTGVERSYRARAYGQVSQEQLEELIEGVEIDGIRYGAIDANLERRTG
ANVWIELTLTEGKNREVRRVLEHLGLKVGRLIRTRYGPFVLGDLPAGAVGEVRQHDLVAF
RQSLTKGKGKDQAAVMVEPIIPAAPETAGNDAKPDAGRKPTARPRPRPTPDRNPSPKPRR
TAKPAKMESRPHGNDESKDAQVEHSTRSPRPPRRKAGWAKPKPKSGPKAGPRRK
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaccaccggcaaggacacccaacgcatcgccaagctgctcgcccgcgcgggc
gtggcgtcgcggcgcgagatcgaacggatgatcggcgagggccgaatcgccctgaacggc
gtggccgtggagaccccggcgacgctgctcccgtcgctgcgcggcgtcaccgtcgacggc
cagccggtgaaggaacccacgcccgcccgcctgttcctgttccacaagcccgtcggcctt
ctcaccgccgcccgcgatccgcggggccgcccgaccatctatgaccggctgcccaagggc
ctgccgcgcctgatgccggtcggccggctcgacctcaacacggaagggctgctgctcctc
accaccgacggcgagctgaagcggcagctcgagctcccctcgaccggcgtcgagcgcagc
taccgcgcccgcgcctacggccaggtcagccaggaacagctcgaggagctgatcgaaggt
gtcgagatcgacggcatccgctatggcgcgatcgatgccaatctcgagcgccgcaccggc
gccaacgtctggatcgagctgacgctgacggagggcaagaaccgcgaggtccgccgcgtg
ctcgagcatctggggctcaaggtcggccgcctgatccgcacccgctatgggccattcgtg
ctcggcgacctccccgcgggtgcggtcggcgaggtgcgtcagcacgacctcgtagccttc
cggcagtcactgacgaagggcaagggcaaggatcaggcagccgtcatggtcgagccgatc
ataccggccgctcctgagacggccggaaacgacgccaagcccgatgccggacgaaagcct
acggcaaggccccgcccgcgcccaactcccgaccgtaatccctcgcccaaaccgcgaagg
accgcgaagccagccaaaatggagtcccgcccgcacgggaatgacgagagcaaggacgcg
caggtcgaacactccacgcgctcccctcgcccgcccaggcgcaaggccggctgggccaag
cccaagcccaagtccgggcccaaagccggtccgcgccgcaaatga
DBGET
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