Sphingomonas cannabina: LZK98_10520
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Entry
LZK98_10520 CDS
T08607
Name
(GenBank) citrate synthase
KO
K01647
citrate synthase [EC:
2.3.3.1
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00020
Citrate cycle (TCA cycle)
scab00630
Glyoxylate and dicarboxylate metabolism
scab01100
Metabolic pathways
scab01110
Biosynthesis of secondary metabolites
scab01120
Microbial metabolism in diverse environments
scab01200
Carbon metabolism
scab01210
2-Oxocarboxylic acid metabolism
scab01230
Biosynthesis of amino acids
Module
scab_M00009
Citrate cycle (TCA cycle, Krebs cycle)
scab_M00010
Citrate cycle, first carbon oxidation, oxaloacetate => 2-oxoglutarate
scab_M00012
Glyoxylate cycle
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
LZK98_10520
00630 Glyoxylate and dicarboxylate metabolism
LZK98_10520
Enzymes [BR:
scab01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.1 citrate (Si)-synthase
LZK98_10520
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Citrate_synt
Motif
Other DBs
NCBI-ProteinID:
UIJ43537
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All DBs
Position
complement(2244702..2245988)
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AA seq
428 aa
AA seq
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MSEVADKPAIAIGNHDYPVRKGSVGPDVIDIRKFYGESGMFTYDPGFTSTASCESALTYI
DGDAGVLLHRGYPIGQLAEHSSFMEVSYLLLNGELPSKDELDKFTHTITRHTMLHEQLAT
FYRGFRRDAHPMAVMCGVVGALSAFYHDSTDITDPTQRMIASHRLIAKMPTIAAMAYKYT
IGQPFLYPQNDLSYTGNFLRMTFGVPAEDYVVDPVIEKAMDRIFILHADHEQNASTSTVR
LAGSSGANPFACIAAGIACLWGPAHGGANEAALNMLREIGKPERIPEYIARAKDKNDPFR
LMGFGHRVYKNYDPRATVMQKTVREVFKAMNVSDPVFDVALQLEEIALKDDYFIEKKLFP
NVDFYSGVILSAIGFPTTMFTALFALARTVGWVAQWNEMISDPDQKIGRPRQLYTGPTER
DYVPIDKR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagtcgccgacaaacccgcgatcgcgatcggcaaccacgactaccccgtccgc
aagggcagcgtgggtccggatgtgatcgacatccgcaagttctacggcgagtcggggatg
ttcacctacgatcccggcttcacctcgacggcgagctgcgaatcggcgctgacctacatc
gacggcgacgccggcgtgctgctccaccgcggctatccgatcggccagctcgccgagcat
tcgagcttcatggaggtcagctacctcctgctcaacggcgagctgccgagcaaggacgag
ctcgacaagttcacccacaccatcacccgtcacacgatgctgcacgagcagctcgcgacc
ttctaccgcggcttccgccgcgacgcgcatccgatggcggtgatgtgcggcgtggtcggc
gcgctgtcggccttctaccacgactcgaccgacatcaccgatccgacccagcggatgatc
gccagccaccggctgatcgcaaagatgccgacgatcgcggcgatggcgtacaagtacacg
atcggccagccgttcctctatccgcagaacgacctctcctacaccggcaacttcctgcgc
atgaccttcggcgtgccggcagaggattatgtcgtcgatccggtgatcgaaaaggcgatg
gaccggatcttcatcctccatgccgaccatgagcagaacgcctcgacctcgaccgtgcgc
ctcgccggctcgtcgggcgccaatcccttcgcctgcatcgcagcgggcatcgcctgcctg
tggggccccgcgcacggcggcgccaacgaggcggcgctcaacatgctgcgcgagatcggc
aagcccgagcgcatcccggaatatatcgcccgcgccaaggacaagaacgacccgttccgc
ctgatgggcttcggccaccgcgtctacaagaactacgatccacgcgcgaccgtgatgcag
aagacggtgcgcgaggtgttcaaggcgatgaacgtctccgacccggtattcgacgtcgcg
ctccagctcgaggagatcgcgctcaaggacgattacttcatcgagaagaagctgttcccg
aacgtcgatttctactcgggcgtgatcctgtcggcgatcggtttcccgacgacgatgttc
acagccctgttcgccctcgcccgcaccgtcggctgggtcgcgcagtggaacgagatgatc
tccgatcccgaccagaagatcggccgcccgcgccagctctataccgggccgaccgagcgc
gattacgttccgatcgacaagcgctga
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