Sphingomonas cannabina: LZK98_10580
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Entry
LZK98_10580 CDS
T08607
Name
(GenBank) pyridoxal-dependent decarboxylase, exosortase A system-associated
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
scab
Sphingomonas cannabina
Pathway
scab00300
Lysine biosynthesis
scab00470
D-Amino acid metabolism
scab01100
Metabolic pathways
scab01110
Biosynthesis of secondary metabolites
scab01120
Microbial metabolism in diverse environments
scab01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
LZK98_10580
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
LZK98_10580
Enzymes [BR:
scab01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
LZK98_10580
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
UIJ47385
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All DBs
Position
2259066..2260241
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AA seq
391 aa
AA seq
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MAIGGRDATEWAADGTPVFVYDMAVVANRIARLRAALPAKIDIHYAIKANPFVPFLQNVS
ELVDGLDVASSGELTKALAVKPAATISFAGPGKRDEELDAAISAGVTINLESEGEAERAL
ALADRLGVTPRLAVRVNPDFELRGSGMKMGGRASPFGIDAVRVPSLVRRLVGAGVDWRGF
HIFAGSQSLDVQAIIETQAATLALAARLADDAGTAPPLVNLGGGFGIPYFAGDVALDVEA
IGAALGERLAARPAILGGSRFAIELGRWLVGEAGVYLTRVVDRKESGGETFLVVDGGLNH
QLAATGNFGTVVRRNYPIALARDVMGSAAETVSIVGPLCTPLDRLADRIAFPRAEPGDLV
AVFLAGAYGATASPAAFLGHPPAREVIGGQA
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
ctggcgatcggcgggcgtgacgccacagagtgggccgccgacggaacgccggtgttcgtc
tacgacatggcggtggtcgcgaaccggatcgcgaggctccgcgccgcgctgccggccaag
atcgacatccattatgccataaaggccaatccattcgttccgtttcttcagaacgtttct
gaactcgtcgatggcctcgacgtcgcctcttctggcgagttgacgaaggcgctcgcggtc
aagccggcggcgacgatcagcttcgcggggccgggcaagcgggatgaggaattggacgcc
gcgatctccgcaggcgtcacgatcaacctcgaatcggagggcgaggcggagcgggcgctg
gcgcttgccgaccgccttggcgtcacgccgcgcctggcggtgcgggtgaatccggatttc
gagctgcgcggttccggcatgaagatgggcgggcgggcctcgccgttcggaatcgatgcc
gtgcgcgtgccgtcgctggtccggcgactggtcggcgcgggcgtcgactggcgtggcttc
catatcttcgccggttcgcagtcgctcgatgtccaggcgatcatcgagacccaggctgcg
acgctcgcgctggcggctcggctcgccgatgatgctggcaccgcgccgcccttggtcaat
ctggggggaggtttcgggattccctatttcgccggcgacgtcgcgctcgacgtcgaggcg
atcggcgccgcgctcggcgaacggctggcggcgcggccggcgatcctcggcggcagccgc
ttcgccatcgagctcggccgctggctggtgggggaggcgggcgtctatcttacccgcgtc
gtcgatcggaaggagagcggcggcgaaaccttcctcgtcgtcgacggcgggctcaatcac
cagctcgccgccaccggcaatttcgggacggtggtgcgccgcaactatccgatcgcgctc
gcccgcgacgtcatggggtcggccgcggagaccgtctcgatcgtcgggccgctctgtacg
ccgctcgaccgactcgccgaccgcatcgctttcccaagggcggaaccgggcgatctggtc
gcggtcttccttgccggggcctatggcgccacggccagtcccgccgccttcctcggccat
ccgccggcgcgggaagtgatcggcggccaagcctaa
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