Sphingomonas cannabina: LZK98_10715
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Entry
LZK98_10715 CDS
T08607
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
scab
Sphingomonas cannabina
Pathway
scab03030
DNA replication
scab03430
Mismatch repair
scab03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LZK98_10715
03430 Mismatch repair
LZK98_10715
03440 Homologous recombination
LZK98_10715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
scab03032
]
LZK98_10715
03400 DNA repair and recombination proteins [BR:
scab03400
]
LZK98_10715
Enzymes [BR:
scab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LZK98_10715
DNA replication proteins [BR:
scab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LZK98_10715
DNA repair and recombination proteins [BR:
scab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LZK98_10715
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DNA_pol3_delta2
DUF3646
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
RuvB_N
AAA_14
AAA_16
AAA_30
AAA_19
AAA_assoc_2
AAA_18
DUF815
AAA_24
Adeno_E1B_55K_N
PIF1
Glyco_tranf_2_5
Motif
Other DBs
NCBI-ProteinID:
UIJ43570
LinkDB
All DBs
Position
2284726..2286351
Genome browser
AA seq
541 aa
AA seq
DB search
MSDSLDLGEPPQPRRDDAYRVLARKYRPQTFGALIGQDAMVTTLGNAIRRDRLAHAFLLT
GVRGVGKTSTARLIAKALNCIGPDGQGGPTIDPCGVCEPCRAIAEGRHIDVIEMDAASHT
GIDDIREIIEASRYAAVSARYKIYIIDEVHMLSKAAFNGLLKTLEEPPAHVKFLFATTEV
NKVPVTVLSRCQRFDLKRIPAELLAGHFAEVAKAEGVEAEPEALALVARAAEGSARDGLS
ILDQAIAHAGEEGGRVTAAAVRDMLGLSDRGAIRALFGHLIAGDASAALAALRQQYDLGV
DPAAVLKTLLETVHGITLAKLGADMSATQAAEEREAFEGWAGELGFPALHRLWQLLLKGH
DEVARAALPIETAEMALLRLVHAASLPDPGELARRLASGEGAPLAAATSAPPPPSPAERP
LPTTVAELAVLLEDNQEQMLGRRVRNSLRPVRFEPPEIVASSATPLPADFTRELGEALRR
ITGRKWRIETDAAPGAATLAEEEAAAEEAERQAVLASPIVAAAMAAFPGAELDWTNRSKR
Q
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattccctcgatctcggcgagccgccgcagcccaggcgcgacgacgcctatcgc
gtgctggcccgcaaataccggccgcagacgttcggcgcgctgatcggccaggatgcgatg
gtcaccacgctgggcaatgcgatccggcgcgaccgccttgctcatgccttcctgctcacc
ggcgtgcgcggggtcggcaagacctcgaccgcgcggctgatcgccaaggcgctcaactgc
atcggaccggacggccagggcgggccgacgatcgacccgtgcggcgtgtgcgagccgtgc
cgcgcgatcgccgaggggcgccacatcgacgtcatcgagatggacgccgccagtcacacc
ggcatcgacgacatccgcgagatcatcgaggcgtcgcgctatgccgcggtctcggcgcgc
tacaagatctacatcatcgacgaggtccacatgctgtcgaaggcggccttcaacggcctg
ctcaagacgctggaggagccgccggcgcatgtgaagttcctgttcgcgaccaccgaggtc
aacaaggtgccggtgacggtgctgtcgcgctgccagcgcttcgacctgaagcgcatcccg
gccgagctgctcgccgggcatttcgccgaggtggccaaggcggagggtgtcgaggcggag
cccgaggcgctggcgctggtcgcgcgggcggcggaaggatcggcgcgcgacggcctctcg
atcctcgaccaggcgatcgcccatgccggcgaggagggcggcagagtgaccgcggcggcg
gtgcgcgacatgctcggcctgtcggatcgcggcgcgatccgggcattgttcggacatctg
attgccggcgatgcatcggcggcgcttgcggcgctgcgccagcaatatgatctcggcgtc
gatccggcggcggtgctcaagacgctgctggagacggtgcacggcattaccctcgccaag
ctcggcgccgacatgtcggcgacccaggccgcggaggagcgcgaggcgttcgaaggctgg
gctggcgagctgggttttccggcgctgcatcgcctgtggcagctgctgctcaaggggcat
gacgaggtcgcgcgggcagccctgccgatcgagactgccgagatggcgttgcttcgccta
gtccacgccgcgagcctgcccgatccgggcgagctcgcgcggcggctggcgagcggggag
ggggcgcctctcgccgcagccacctccgcaccgccgccaccatcgcccgccgagcggccg
ttgccgaccaccgtcgcggagcttgcggtgctgttggaagataatcaggaacagatgctc
ggccggcgcgtacgcaattcgctgcggccggtgcggttcgagccgccggagatcgtcgcc
agctcggcgacgccgctgccggcggatttcacacgggagcttggcgaggccttgcggcgg
atcacgggtcgcaagtggcgtatcgagaccgatgccgcaccgggcgccgccacgctggcc
gaggaggaagcggcggcggaggaggcggagcgccaggcggtgctcgcctcgccgatcgtt
gctgcggcaatggcggcctttccgggcgctgaactcgactggaccaatcggagcaaacga
cagtga
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integrated database retrieval system
