Sphingomonas cannabina: LZK98_11030
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Entry
LZK98_11030 CDS
T08607
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
scab
Sphingomonas cannabina
Brite
KEGG Orthology (KO) [BR:
scab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
scab03016
]
LZK98_11030 (truA)
Enzymes [BR:
scab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
LZK98_11030 (truA)
Transfer RNA biogenesis [BR:
scab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LZK98_11030 (truA)
Prokaryotic type
LZK98_11030 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
UIJ43624
LinkDB
All DBs
Position
complement(2346349..2347089)
Genome browser
AA seq
246 aa
AA seq
DB search
MTRFALTIEYDGRPFMGWQVQDHGPSVQEAIERAAYEVTGEEVLVQAAGRTDTGVHATGM
RAHCDIAKPLTPFRLMEALNARLRPAPIAILGCEVVPDDWHARFSCIARHYEYRIAVRRA
PLTFEKGLAWRIHAPLDAAAMAEGAAHLVGRHDFTTFRSAHCQADNPVRTLDRLEVEAKG
DRITVHASARSFLHHQVRSMVGCLALVGQGKWRPDDMRRALEARDRAALGLNAPPDGLYF
IRADYP
NT seq
741 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtttcgcgctcaccatcgaatatgacggccgccccttcatgggctggcaggtg
caggatcatggccccagcgtacaggaggcgatcgagcgggcggcctatgaggtcaccggc
gaggaggtgctggtccaggccgccggccgcaccgacacgggcgtccacgcgacggggatg
cgcgcccattgcgacatcgccaagccgcttacgcctttccgcctgatggaggcactcaac
gcccgcctgcgccctgccccgatcgcgatcctcggctgcgaggtggtgcccgacgactgg
cacgcccgcttctcctgcatcgcgcggcactacgagtaccgcatcgccgtgcgccgcgcg
ccgctcaccttcgagaaggggctggcctggcgtattcacgccccgctcgacgccgcggcg
atggccgagggcgccgcacatctcgtcggacgccatgacttcaccaccttccgctcggcg
cactgccaggccgacaatccggtgcgcacgctggaccggctcgaggtggaggcgaagggc
gaccgcatcaccgtccacgcctcggcacgctcgttcctgcatcaccaggtgcgctcgatg
gtcggctgcctcgcgctggtcggccaaggcaagtggcggcccgacgacatgcgccgcgcg
ctcgaggcgcgcgaccgcgccgcgctcggcctcaacgcgccgcccgacgggctctacttc
atccgcgccgattatccctga
DBGET
integrated database retrieval system
